AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01419 ATGCCACCATTAACAAAAACCATCATATATCTAATCTTTATATCCTCTCTTTTAATCCCAACAACAACAGCCAATGACCAATCTTTCATCCAGATTCTCATAACCCAAAATGGTCTTGATTTCATCAAGAATTTATTAATATCAAAAGCAGTTTCATCACTCACACCCACATCAATATCAGATATTGAAAAGGCTGTAAAGATTCCTGTAATTGGTAAAGTTGACATCTTGCTGTCTGATATTGTTATTAATAAGGTTAATGTTGGGTCATCTGGTGTTAGACCAAGTGAAGGTGGTGTTTCTATTGTTGGTTCGGATTTTAGTTGTGATTTGAGTGTGAAATGGCATTATTCTTATGGTACTTGGGTTGGCCCGATTTCGGTTTCTGATAGTGGGACTGCTTCTGTTGAGGTTAATGGCATGGAAATTGGTATAGCTCTAGGTTTGGATAATCAAGACGGATCATTGAAACTTTCCATGATGGAATGTAATTGTCAAATACAAGATATCTCCATAGACCTAGATGGAGGAGCATCTTGGCTCTATCAAGGGATTGTCGATGCTTTCAAAGAAGAAATAGTATCAGCAGTAGAAAAGGCAATTACCAAGAATTTTAAGACTGAAATTTCAGAGCTTGGATCTATTCTACGAACTCTTCCAAAACATATTCCAGTGGATGATACTTCCTCATTAAATGTTACATTGGTTAACAGCCCATTCTTGAGTGACACTTCATTAGGGTTCGAGATAAATGGGTTATTCGTCGAGTCAAAAACCGACCCGCGTGCATATCACAACCATTTGCAGCCACCACTCGCATGTTCAGACCCTCCAAAAATGGTTGGGATTGCCCTAGATGAAGCTGTCTTCAAATCTGCATCTGCTTTATACTACGATGCTACGTTTATGCACTGGATTGTTGATAAAGTACCCGACCAATCTCTTCTTAACACGGCTGGGTGGAGATTTATTGTTCCTCAACTCTACAAAAAGTACCCAAATGCTGATATGAATTTGGATATTTCTCTTTCTAATCCTCCGGTTGTGCAAATATCATCACAGAAAATTGGTGCTACAGTTTATGCAGATTTGATCATAGATGTTCTTAAAGGAGATGAGACAATCCCCGTTGCTTGTATCTCATTGGTAATTGCTGGCACAGGTTCGGTACAAATTAGCAGAAATAACCTTACTGGTCATTTGAAAATGGATGATTTCACCATGACGTTAAAATGGAGCAAGATTGGTACCTTGCATATGTTTCTTATTCAGCCAGTGATTTGGACTATGATCGAAACTGTTTTCATACCATATGCAAATGCACGACTTGGGACAGGGTTCCCTTTGCCTATAATACATGGGTTTTTGCTTGAAAATGCTGAGATAATATCCTCGGATTCTAGAATCACGGTGTGCAGTGATGTTAGCTACGAGGGATCCGTTGATAGCAGCCAAACTGGATTTTACACGTCGTAG 1476 38.75 MPPLTKTIIYLIFISSLLIPTTTANDQSFIQILITQNGLDFIKNLLISKAVSSLTPTSISDIEKAVKIPVIGKVDILLSDIVINKVNVGSSGVRPSEGGVSIVGSDFSCDLSVKWHYSYGTWVGPISVSDSGTASVEVNGMEIGIALGLDNQDGSLKLSMMECNCQIQDISIDLDGGASWLYQGIVDAFKEEIVSAVEKAITKNFKTEISELGSILRTLPKHIPVDDTSSLNVTLVNSPFLSDTSLGFEINGLFVESKTDPRAYHNHLQPPLACSDPPKMVGIALDEAVFKSASALYYDATFMHWIVDKVPDQSLLNTAGWRFIVPQLYKKYPNADMNLDISLSNPPVVQISSQKIGATVYADLIIDVLKGDETIPVACISLVIAGTGSVQISRNNLTGHLKMDDFTMTLKWSKIGTLHMFLIQPVIWTMIETVFIPYANARLGTGFPLPIIHGFLLENAEIISSDSRITVCSDVSYEGSVDSSQTGFYTS 491
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01419 491 Pfam LBP - BPI - CETP family, C-terminal domain 276 477 IPR001124 GO:0008289(InterPro)
Enbr6g01419 491 Pfam LBP - BPI - CETP family, N-terminal domain 38 203 IPR017942 GO:0008289(InterPro)
Enbr6g01419 491 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 31 242 IPR017943 GO:0008289(InterPro)
Enbr6g01419 491 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 247 477 IPR017943 GO:0008289(InterPro)
Enbr6g01419 491 FunFam phospholipid transfer protein-like 37 217 - -
Enbr6g01419 491 Gene3D - 37 217 - -
Enbr6g01419 491 Gene3D - 31 463 - -
Enbr6g01419 491 CDD BPI2 280 476 - -
Enbr6g01419 491 PIRSF Lipid-binding-protein 7 483 IPR030675 GO:0005615(InterPro)|GO:0008289(InterPro)
Enbr6g01419 491 PANTHER OS06G0309200 PROTEIN 12 485 IPR045897 -
Enbr6g01419 491 SMART bpi2-2 275 473 IPR001124 GO:0008289(InterPro)
Enbr6g01419 491 SMART bpi1-3 34 259 IPR017942 GO:0008289(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01419 K05399 lipopolysaccharide-binding protein
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:207069886 Enbr6g01419 Enbr-Chr6:49186367 dispersed