AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01422 ATGGAGAAAGCAAGAAATACAAGCGAAATACCGGTTACTTGGAGGGGGAAGAAGTATGTTGTGACTATGGATTTAGGTGCTACTTTAAAAGAATTGGGGCATGAGTTACAGAAACTGACTGCAGTGAAAGCAGATACTATGAAGCTTATTGTTCGAGCCCAGAAATCATCAAAATTGTTATCTCCTTTCTCTGACGAACACTCTCATGTTACCTTGAAGGAAGCTTCCATCATTGAGGGGAAGGCTATACAAATGATGGGAGTTCCAAAAGAAGAGATTGATCAAGTTCTTAAAGATGCAAAGACGGATATGAGAATAGCTGGGTTTGATGAAGAGGAGAAGCGAATTAGACAAAGGGCGTCGAATGGGATTGATACCCCGTTGCAGCTTCCACAAGGAAATTATGTTTTTGGCGCTTTTAAAACACTTGATCTTCCAGGGATCGAGTTATATCCTCCGGCTTCAGAGGCATTGAAACTAATGCACACGCTTGCTGCAGATCCAGGAATAGTTGCTATCATGAATAAGCATAAATGGCATGTGGGAATTATGACTGAGATGGCTCCAGAGGGTTATGTTGGCGTGAGTCCTGTGTGCATTCTTGGTTTTAACAAGAATCATGGCGAGGAGATATCTTTGCGTCTTCGAACTGATGATCTCAAGGGTTTCAGAAAATATCAGAGCATTAAGAAGACTCTTTTGCATGAACTTGCCCATATGGTTTACTCTGAACATGATGCAAAATTCTTTGCTCTAGATAGTCAGCTTAACAAGGAGGCCAGTGCTCTAGACTGGACTAGATCCACGGGTCACACGTTAAGTGGATCCCAGAAGACACAGCAACATGGATATGAGTTTCATGTTACTGATAGTAGTATTAGAGGTAGTTTGTCTCATAAACTTGGAGGAAGTCAGTCATCCAGTTCATTGGCAAATGCTCGAGCATCTTCAGTTGCTGCTGCTTACGAACGTTTAGTAATTGCATCCAACAATCTATCAAGAACACCCGAATCACATAAAGAACCCGATCCTGATGATTCTATGGATGTAACTATGTATAAGCCAGATGTTCTGGACCTGGGCGAAAAACAAACTTGTGAACCTGACCCAGATGACCATGAAGTAATAAATAGAAATGAGCCCAACTCGGACCTGAACATCAATAAGCCAGATGCTATGCACATCAGTGAGAAACAAACCTATGAACCTGACCCTGATGACCATGAAGTAAGTACTAAAATTGAGCCCAATCCGGATGTGGCCTTGAATAAGCCACATGCTATGGACATTAGCGAGAAGCAAGCTTATGAACCTGATCCTGATGACCATGAAGTGCTTCACAGCAAAAATGAGCCTGATCCGGATGATAGTTTAAACAGTGAAGCTATGGAATCTGAACCATGTGGCGATTTGACCCAAAACAATGTGTCTTTTGTTGAATTGGGTACTTTGGTTGGTGTGTCTGAAGATGAACACAAGAGGGAAATCCACGAGCCTGATCCTGATGATGGCATCTTGCATGATGATGAACTACAGAGAATTCAAGATCCTGTCATGATTGCGTGTAATCGTTTGAATAAATCCATTAAGATGCTGCAATCAGAAGTTAGCCCTTCAGAGGCTGCAGTGGTTTTCCAGACACTCGTTAAGATTGTCAGGAATGTTATTGAACACCCCGATGAAACAAAATTCAAGAAACTTCGCAAGGCTAACCCTGTAATCCATAAGAACATAGCAAGTTACAATGCTGCAATGGAGATACTGTTTTTGATTGGTTTTTGTGAAGATGTTGTTCAAGACGAGATCGGTAGAGCAGAGGCTTATTTGGTGTTGAAGAGGAATGATCCAGGCCTGTTGTGGCTGGCCAAATCCTCCTTGGAGACATGCATTGCTTTCTAA 1899 42.02 MEKARNTSEIPVTWRGKKYVVTMDLGATLKELGHELQKLTAVKADTMKLIVRAQKSSKLLSPFSDEHSHVTLKEASIIEGKAIQMMGVPKEEIDQVLKDAKTDMRIAGFDEEEKRIRQRASNGIDTPLQLPQGNYVFGAFKTLDLPGIELYPPASEALKLMHTLAADPGIVAIMNKHKWHVGIMTEMAPEGYVGVSPVCILGFNKNHGEEISLRLRTDDLKGFRKYQSIKKTLLHELAHMVYSEHDAKFFALDSQLNKEASALDWTRSTGHTLSGSQKTQQHGYEFHVTDSSIRGSLSHKLGGSQSSSSLANARASSVAAAYERLVIASNNLSRTPESHKEPDPDDSMDVTMYKPDVLDLGEKQTCEPDPDDHEVINRNEPNSDLNINKPDAMHISEKQTYEPDPDDHEVSTKIEPNPDVALNKPHAMDISEKQAYEPDPDDHEVLHSKNEPDPDDSLNSEAMESEPCGDLTQNNVSFVELGTLVGVSEDEHKREIHEPDPDDGILHDDELQRIQDPVMIACNRLNKSIKMLQSEVSPSEAAVVFQTLVKIVRNVIEHPDETKFKKLRKANPVIHKNIASYNAAMEILFLIGFCEDVVQDEIGRAEAYLVLKRNDPGLLWLAKSSLETCIAF 632
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01422 632 SMART PGNneu 543 612 - -
Enbr6g01422 632 Pfam PUB domain 543 617 IPR018997 -
Enbr6g01422 632 Gene3D - 525 626 - -
Enbr6g01422 632 SUPERFAMILY Ubiquitin-like 6 90 IPR029071 -
Enbr6g01422 632 ProSiteProfiles WLM domain profile. 128 326 IPR013536 -
Enbr6g01422 632 MobiDBLite consensus disorder prediction 361 424 - -
Enbr6g01422 632 CDD PUB-WLM 529 628 - -
Enbr6g01422 632 MobiDBLite consensus disorder prediction 332 351 - -
Enbr6g01422 632 MobiDBLite consensus disorder prediction 436 472 - -
Enbr6g01422 632 PANTHER ZINC METALLOPROTEINASE-LIKE PROTEIN 1 424 - -
Enbr6g01422 632 Pfam WLM domain 150 325 IPR013536 -
Enbr6g01422 632 MobiDBLite consensus disorder prediction 395 414 - -
Enbr6g01422 632 Gene3D - 3 93 - -
Enbr6g01422 632 SUPERFAMILY PUG domain-like 518 630 IPR036339 -
Enbr6g01422 632 MobiDBLite consensus disorder prediction 436 456 - -
Enbr6g01422 632 MobiDBLite consensus disorder prediction 336 351 - -
Enbr6g01422 632 MobiDBLite consensus disorder prediction 361 379 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01422 K22685 DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:49234156 Enbr8g00401 Enbr-Chr8:10625730 dispersed