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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01450 ATGGAGAAATATATAAGGAAGAAAGGGACTATTCAGAACTCTCCTTTCTATAAACACACTCTACTTGCTAAGTTAACTCTCCACTTCCCTTTCCTTCTCAAAGTAGCAAAATCTCCAAAATGTCCTGTTTTTTCTTTCACAAGATTCAAGAAACTGAAGTTGGGCTGTGAAAAATTAAGTCTTTCATCAATGCAAGCATCAGAAAACAATAGATCGGTGATACCCAGTTCAATTTACTGTAAATCTTTACAAGAAATTGATGTTTCATGTGAAACACAATTTCAGTTTCAATTTCAATTTTCACCTAAATCGGAACCTTATTCCACCTTGGAATCATCATCTGCAAGTGGGAGTTGTACCACAATGTACAACTCACCTACTTCATGTGATGTGAATAATTTTAGGTTTAAGTTAAGAGAATTAGAGAATGTGATGTTAGGTGATACTGATTTTGGTGATGTAGTAGACTTGCCTGATATAGAAATATGGAAAGAAATGATGGTAGGGTTTCCTAAAAGGGATTTAAAACAAGTACTTGTTGCATGTGCCAAGTCTATTTCTAATGATGATTTGTTAAATGCCCAGTTGCTAATATCAGAACTCCGGCAAATGGTGTCTGTTGCCGGAGAGCCGATGCAGCGACTGGGCGCTTATATGTTGGAAGGACTTGTAGCTCGGCTATCTTGTTCTGGTAGCACGATCTACAAGTCTGACCTTCCGTTAAATAGGCATATTTTGTACGAGATTTGCCCGTATTTTAAGTTTGGGTATATGTCTGCAAATGGTGCGATAGCTGAAGCAATGAAGTATGATAAACGGGTACATATTGTAGATTATTATATCGGGCATGGGAGTCAGTGGGTCCCTTTGATCCAAGCGTTTGCGAAACGACCTGGTGGTCCCCCGCATATCCGGATAACGGGGTTCCACGACTCCTCAAACGGGTTAAGGACCGTGGGTAGAAGACTTTGTAAGGTTGCAAAGGCTTACAATGTGCCTTTTGAGTTTCACACTGAAGTCGGGCTAGAAAGCGTCCAAGTTCAACCCGGTGAGTCTTTAGCGGTGAATTTTGCGTTTGTGTTGCACAGAATGCCGGATGAGAGTGTTAGCATTAGAAACCATAGAGATCGAGTTTTGAGGCTAGTAAAGAGTATGAACCCAAAAGTTGTAACCTTAGTCGAGCAAGAGTCCAACACAAACACAGCCCCTTTTTACCCTCGGTTTCTTGAGGCTCTTGATTACTACAACGCAATGTTCGAGTCAATAGACATCACACTTCCACGAGAACATAAGGAAAGAATAAACGTGGAGCAACATTGTCTAGCACGAGACGTTGTAAACATAATAGCGTGTGAGGGAGACGAGAGAGTTGAACGACACGAGCTTTTGGGCAAGTGGAAGTTAAGGTTCAGTATGGCCGGGTTTAGCCCATGCCCGATGAGCCCAATTGTGAACGGAACAATCAAACGGCTACTAAAGAACTACAGTGATAGATATAGGCTTGAAGAAAGAAATGGAGCTTTGTATCTTGGCTGGATGAATAGAGACTTGGTTGCTTCTTGTGCTTGGAAGTGA 1575 41.33 MEKYIRKKGTIQNSPFYKHTLLAKLTLHFPFLLKVAKSPKCPVFSFTRFKKLKLGCEKLSLSSMQASENNRSVIPSSIYCKSLQEIDVSCETQFQFQFQFSPKSEPYSTLESSSASGSCTTMYNSPTSCDVNNFRFKLRELENVMLGDTDFGDVVDLPDIEIWKEMMVGFPKRDLKQVLVACAKSISNDDLLNAQLLISELRQMVSVAGEPMQRLGAYMLEGLVARLSCSGSTIYKSDLPLNRHILYEICPYFKFGYMSANGAIAEAMKYDKRVHIVDYYIGHGSQWVPLIQAFAKRPGGPPHIRITGFHDSSNGLRTVGRRLCKVAKAYNVPFEFHTEVGLESVQVQPGESLAVNFAFVLHRMPDESVSIRNHRDRVLRLVKSMNPKVVTLVEQESNTNTAPFYPRFLEALDYYNAMFESIDITLPREHKERINVEQHCLARDVVNIIACEGDERVERHELLGKWKLRFSMAGFSPCPMSPIVNGTIKRLLKNYSDRYRLEERNGALYLGWMNRDLVASCAWK 524
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01450 524 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 125 523 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Enbr6g01450 524 ProSiteProfiles GRAS family profile. 166 524 IPR005202 -
Enbr6g01450 524 Pfam GRAS domain family 175 524 IPR005202 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01450 K27748 scarecrow-like transcription factor PAT
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:49908469 Enbr6g03330 Enbr-Chr6:121294240 dispersed
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Enbr7g03112 . 315 340 GRAS Transcription Factor family AT5G48150 80.769 3.25e-08 50.1
Enbr6g02766 . 277 346 GRAS Transcription Factor family AT5G48150 60.0 1.96e-16 75.9
Enbr6g01450 . 41 490 GRAS Transcription Factor family AT5G48150 61.05 0.0 570.0
Enbr3g00975 . 277 346 GRAS Transcription Factor family AT5G48150 60.0 1.14e-17 78.6
Enbr5g02438 . 248 651 GRAS Transcription Factor family AT3G54220 80.288 0.0 655.0
Enbr4g02259 . 317 346 GRAS Transcription Factor family AT5G48150 80.0 6.45e-10 54.7
Enbr4g03299 . 150 507 GRAS Transcription Factor family AT1G66350 29.551 4.83e-56 193.0
Enbr2g02508 . 144 507 GRAS Transcription Factor family AT1G66350 43.915 5.82e-98 309.0
Enbr1g05174 . 178 487 GRAS Transcription Factor family AT3G03450 27.885 1.17e-28 116.0
Enbr1g05175 . 211 583 GRAS Transcription Factor family AT2G01570 27.226 7.77e-53 187.0
Enbr1g05176 . 170 547 GRAS Transcription Factor family AT3G03450 26.854 3.81e-47 170.0
Enbr1g05177 . 170 479 GRAS Transcription Factor family AT3G03450 28.483 1.13e-34 134.0
Enbr1g05173 ACH 178 547 GRAS Transcription Factor family AT3G03450 28.836 2.51e-49 176.0
Enbr6g01608 . 304 444 GRAS Transcription Factor family AT1G55580 60.993 1.51e-62 196.0
Enbr1g05178 . 178 547 GRAS Transcription Factor family AT3G03450 28.571 2.51e-49 176.0
Enbr1g05179 . 211 583 GRAS Transcription Factor family AT2G01570 27.226 7.77e-53 187.0
Enbr1g05180 . 170 547 GRAS Transcription Factor family AT3G03450 26.854 3.81e-47 170.0
Enbr1g05181 . 170 479 GRAS Transcription Factor family AT3G03450 28.173 1.72e-35 136.0
Enbr1g05182 . 170 547 GRAS Transcription Factor family AT3G03450 27.11 2.79e-46 168.0
Enbr1g02835 . 309 400 GRAS Transcription Factor family AT2G01570 69.565 5.64e-35 134.0
Enbr3g02118 . 153 422 GRAS Transcription Factor family AT1G66350 21.181 1.83e-09 57.4
Enbr2g03609 . 154 518 GRAS Transcription Factor family AT5G17490 33.924 3.78e-54 188.0
Enbr4g03308 . 150 507 GRAS Transcription Factor family AT1G66350 29.551 4.93e-56 193.0
Enbr4g03307 . 150 507 GRAS Transcription Factor family AT1G66350 29.551 3.76e-56 193.0
Enbr1g08831 . 161 529 GRAS Transcription Factor family AT1G14920 34.896 3.42e-69 229.0
Enbr6g03330 . 86 768 GRAS Transcription Factor family AT1G07530 45.649 0.0 563.0
Enbr1g05920 . 139 507 GRAS Transcription Factor family AT1G66350 29.412 8.08e-56 192.0
Enbr1g05921 . 150 507 GRAS Transcription Factor family AT1G66350 29.551 6.65e-56 193.0
Enbr9g02176 . 1 656 GRAS Transcription Factor family AT1G63100 49.698 0.0 556.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Enbr GRAS 7.2e-128 CL0063 TF GRAS