AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enbr6g01462 | ATGTCATCTAAATCAACTAGTAGAACTCATTGTTCCAAAAGTAGTTCATCAAGGTTGAGACATGGTGCTAGAGTAGTATTACAGACCCCAATTGATGCTAAACTTCAGGTCGATTTTGAAGAATCCGAAAGACAATTTGATTACTCGACTTCTGTCGATGTTAATGCGTCGACTTCAACTAGTAATGTTCCATCGCCGACTGTATCGTCTTATTTACAGAAAATGCAAAGAGGGAGTCAAATACAACCTTTTGGTTGTTTGATTGCCATTGATGAACAGAGTTTTGGTGTAATAGCTTATAGTGAAAATGCCTTAGAGATGCTTGATTTAGCTCCACACGCAGTCCCCAGTATAGAGCAACAAGAGGCTTTAACATTTGGGACGGATGTACGAACCCTTTTTAAATCTTCAAGTGCATCTGCACTTCAAAAAGCAGCTAATTTCCAAGAGGTTAATCTGTTGAATCCTATATTAGTTCATTGTAGGAGTTCAGGTAAACCATTTTACGCCATTTTACATAGGAATGATGTGGGGTTGATGATAGATTTAGAGCCTGTGAATCCTGCAGATGTGCCCGTAACAGCTGCTGGAGCTTTAAAATCTTATAAGCTTGCAGCTAAATCAATATCTAGGTTACAATCGTTACAAAGTGGGAATATATCTCGAATGTGTGATGTGTTGGTTAAAGAAGTGAGTGATTTAACCGGTTATGATCGTGTTATGGTTTATAAATTTCATGAAGATGAACATGGTGAAGTTATTGCCGAGTGTCAAAAGCCTGATCTTGAACCTTATCTTGGCTTACATTACCCTGCTACTGATATCCCACAAGCTTCAAGATTTCTTTTTATGAAAAATAAGGTTAGAATGATTTGTGATTGTGCGGCTCAATCTGTGAAGGTGGTTCAAACCAAGAGTTTATCTCAGCCGTTGAACCTCTCTGAATCTGCTTTGAGGGCACCACATGGATGTCATTCGAAGTACATGGCAAATATGGGCTCGATTGCATCTCTTGTGATGTCTGTAACGATCAATGAGGGTGATGATGACGATGAGGATGATGGCGAGGAATCTGAAAGTGGGATCTATCAGCAACAAAAGCAAAAGGGGAAAAGATTATGGGGTTTGGTGGTTTGTCATCATTCAACTGCTCGATTTGTACCGTTTCCTTTGAGGTATGCATGTGAGTTTTTGATTCAAGTTTTTGGTGTTCAAATAAATAAAGAAGTTGAACTGGCTGGTCAATTGCGCGAAAAACATATCTTGAAAACACAAACCGTGCTTTGTGATATGCTTTTGAGAGTTGCTCCTATGGGGATCATGACTCAATCGCCTAATGTAATGGATCTTGTTACATGTGATGGGGCAGCTCTATACTACAAGAATAAGTGTTCATTACTTGGGATCACTCCAACAGAATCACAAATCAGAGATATAGCAAATTGGCTTCTGGAAGAGCATGCGGGGAGTACGGGTTTAAGCACGGATAGTCTCATGGATGCCGGATATTCAAATGCTTTGATTTTTGGACCAGCTGTTTGTGGAATGGCGGCTGTCAAGATTACCTCGAAAGATTTCCTTTTTTGGTTTCGGTCCCATACAGCAAAGGGAGTGAAATGGGGTGGGGCAAAACATGATCCTGATGATAAAGATGATGGAAGAAAAATGCATCCACGATCATCATTTAAAGCGTTTTTGGAAGTGGTTAAGAACCGGAGTTTACCATGGGAAGATGTGGAAATGGATGCCATTCATTCTTTACAGTTGATAATTAGGGGGTCTTTGCAAGATGACGAGATGGTAGTTGATGCTGCTGCTGCTGATGATGGTATGAAAACCATATGTGTTCCCCCCATTGATACGAGCATACAACGGGTTGATGAACTGCGGGTTGTAGCTAATGAAATGGTTCGGCTTATTGAGACAGCTTCAGTTCCTATACTCGCCGTTGATGGTAATGGAAATATCAGTGGTTGGAACGATAAAATATCCGAGATTACTGGATTGCCATTGGATCAAGCTGTTGGTGTCCCGCTAGTCAATTTGGTTGTTGATGAATCAGTTGATGAAGTGAAAATGATGCTCTCCTCTGCTTTACAAGGGATCGAGGAGAAAAATATTGAAATTAACCTTAAATGTTTCGGTAGTCAAGAAACAGATGGTCATGTGACACTTGTTACAAATGCTTGTTGCAGCCGTGATTTAAGTGAAACGATCGTAGGGGTATGCTTTGTCGGACAAGATCTAACAGCTCAAAAGTTAATCACAGACAAATACACAAAAGTCAAAGGTGATTATACTAGTATTGTGCGTAACCCATGTGCACTTATTCCTCCGATTTTCATGATGGATGAGTATGGTAAATGCTTGGAATGGAATGATGCCATGGAAAAGTTAACCGGTTTGAAGAGGGAAGAAGCCAACAACCGTATGCTTCTTGGTGAAGTTTTTACTATTGGTAGTTTCGGCTGTTGGGTAAAAGAAGATACTCTGACAAGGCTCAAAATATTACTAAATGAGGTAATATCTGGATTAGATTCAGATAAATTGTTGTTCGGGTTTTTTGACCAAAATGGTAAGTACGTGGAGGCGTTACTTTCTGCCACCAAAAGGGTTGATGGAGATGGAAAAATTACGGGGGTTTTGTGTTTTCTACATGTAACGAGCCCTGAGCTTCAACATGCCATGTTGATGCAGAAAATGTCTGAGCAGGCTGCTTTAAATAGCCTTACAAAGGTGTCTTATTTGCGCCATGAGCTAAAAAGTGGTTTAAACGGGATTAAATGTATCGAGGACTTAATGGTAGCAACAACATTGCGTGAAGAGCAGAGACATATTGTGCATAAGAGTCACTTGTGTCGAGAACAATTAGCACAGATTGTAGATGATACCGATATAGAAAGCATCGAACAATGCTATTTGGAAATGAAATGCGCGGAGTTTAAACTCGGGGAGTCTTTGGAGGTGGTTTTGAACCAAATCACGATCCTGAGCTGTGAACGGAAGGTGGAGGTCCTTTATGATGCACCCGAACAAGTGTTATCGTTATCTGTATTTGGTGACAATTTGAGGCTTCAACAAGTCCTTTCTGACTTCTTATCTAATGCTCTCAGTTTCACTCCTGAATTTGAAGGATCTTCAATTCAGTTTCGTGTAACTCACAGGATGGAACACATAGGAACGAAAATTCAAGTTGCACATCTTGAATTCAGAATTACCCATCCGGCACCTGGGATCCCTGAGAAATTGATTCAAGATATGTTCCACACCAGCAGAAGTGTCTCAAGAGAAGGTCTTGGACTTTACATAAGTCAAAAGCTCGTCAAGATCATGAATGGAACGGTACAGTATCTCAGAGAAGCCGATAGAGCTTCTTTCGTTGTTTTGATCGAGTTTCCAGTATCACACTCGTCGACTGCTGACAGTAAACGCTCAAAAAGAAACTGA | 3447 | 40.41 | MSSKSTSRTHCSKSSSSRLRHGARVVLQTPIDAKLQVDFEESERQFDYSTSVDVNASTSTSNVPSPTVSSYLQKMQRGSQIQPFGCLIAIDEQSFGVIAYSENALEMLDLAPHAVPSIEQQEALTFGTDVRTLFKSSSASALQKAANFQEVNLLNPILVHCRSSGKPFYAILHRNDVGLMIDLEPVNPADVPVTAAGALKSYKLAAKSISRLQSLQSGNISRMCDVLVKEVSDLTGYDRVMVYKFHEDEHGEVIAECQKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAAQSVKVVQTKSLSQPLNLSESALRAPHGCHSKYMANMGSIASLVMSVTINEGDDDDEDDGEESESGIYQQQKQKGKRLWGLVVCHHSTARFVPFPLRYACEFLIQVFGVQINKEVELAGQLREKHILKTQTVLCDMLLRVAPMGIMTQSPNVMDLVTCDGAALYYKNKCSLLGITPTESQIRDIANWLLEEHAGSTGLSTDSLMDAGYSNALIFGPAVCGMAAVKITSKDFLFWFRSHTAKGVKWGGAKHDPDDKDDGRKMHPRSSFKAFLEVVKNRSLPWEDVEMDAIHSLQLIIRGSLQDDEMVVDAAAADDGMKTICVPPIDTSIQRVDELRVVANEMVRLIETASVPILAVDGNGNISGWNDKISEITGLPLDQAVGVPLVNLVVDESVDEVKMMLSSALQGIEEKNIEINLKCFGSQETDGHVTLVTNACCSRDLSETIVGVCFVGQDLTAQKLITDKYTKVKGDYTSIVRNPCALIPPIFMMDEYGKCLEWNDAMEKLTGLKREEANNRMLLGEVFTIGSFGCWVKEDTLTRLKILLNEVISGLDSDKLLFGFFDQNGKYVEALLSATKRVDGDGKITGVLCFLHVTSPELQHAMLMQKMSEQAALNSLTKVSYLRHELKSGLNGIKCIEDLMVATTLREEQRHIVHKSHLCREQLAQIVDDTDIESIEQCYLEMKCAEFKLGESLEVVLNQITILSCERKVEVLYDAPEQVLSLSVFGDNLRLQQVLSDFLSNALSFTPEFEGSSIQFRVTHRMEHIGTKIQVAHLEFRITHPAPGIPEKLIQDMFHTSRSVSREGLGLYISQKLVKIMNGTVQYLREADRASFVVLIEFPVSHSSTADSKRSKRN | 1148 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enbr6g01462 | 1148 | CDD | PAS | 643 | 709 | IPR000014 | - | |
| Enbr6g01462 | 1148 | CDD | PAS | 776 | 886 | IPR000014 | - | |
| Enbr6g01462 | 1148 | ProSitePatterns | Phytochrome chromophore attachment site signature. | 319 | 328 | IPR013516 | - | |
| Enbr6g01462 | 1148 | MobiDBLite | consensus disorder prediction | 346 | 366 | - | - | |
| Enbr6g01462 | 1148 | SMART | HKATPase-4 | 1020 | 1136 | IPR003594 | - | |
| Enbr6g01462 | 1148 | NCBIfam | PAS domain S-box protein | 779 | 814 | IPR000014 | - | |
| Enbr6g01462 | 1148 | NCBIfam | PAS domain S-box protein | 639 | 753 | IPR000014 | - | |
| Enbr6g01462 | 1148 | SUPERFAMILY | GAF domain-like | 418 | 595 | - | - | |
| Enbr6g01462 | 1148 | FunFam | Phytochrome | 973 | 1134 | - | - | |
| Enbr6g01462 | 1148 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 1020 | 1133 | IPR003594 | - | |
| Enbr6g01462 | 1148 | Gene3D | PAS domain | 76 | 322 | - | - | |
| Enbr6g01462 | 1148 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 75 | 188 | IPR035965 | - | |
| Enbr6g01462 | 1148 | PANTHER | OS08G0260000 PROTEIN | 1 | 722 | - | - | |
| Enbr6g01462 | 1148 | SMART | gaf-1 | 219 | 420 | IPR003018 | GO:0005515(InterPro) | |
| Enbr6g01462 | 1148 | Gene3D | - | 953 | 1128 | IPR036890 | - | |
| Enbr6g01462 | 1148 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Enbr6g01462 | 1148 | Gene3D | PAS domain | 778 | 892 | - | - | |
| Enbr6g01462 | 1148 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 623 | 745 | IPR035965 | - | |
| Enbr6g01462 | 1148 | Gene3D | - | 415 | 588 | IPR043150 | - | |
| Enbr6g01462 | 1148 | ProSiteProfiles | PAS repeat profile. | 632 | 702 | IPR000014 | - | |
| Enbr6g01462 | 1148 | FunFam | Phytochrome | 415 | 546 | - | - | |
| Enbr6g01462 | 1148 | Pfam | Phytochrome region | 423 | 597 | IPR013515 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 747 | 767 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 234 | 253 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 319 | 340 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 134 | 156 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 440 | 460 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 635 | 651 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 654 | 669 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 558 | 576 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 727 | 744 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | PRINTS | Phytochrome signature | 525 | 544 | IPR001294 | GO:0006355(InterPro)|GO:0009584(InterPro) | |
| Enbr6g01462 | 1148 | ProSiteProfiles | Histidine kinase domain profile. | 915 | 1136 | IPR005467 | - | |
| Enbr6g01462 | 1148 | Pfam | GAF domain | 221 | 409 | IPR003018 | GO:0005515(InterPro) | |
| Enbr6g01462 | 1148 | PIRSF | Phytochrome-conventional | 2 | 1143 | IPR012129 | GO:0006355(InterPro)|GO:0009585(InterPro)|GO:0009881(InterPro)|GO:0017006(InterPro)|GO:0042803(InterPro) | |
| Enbr6g01462 | 1148 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 779 | 883 | IPR035965 | - | |
| Enbr6g01462 | 1148 | Pfam | PAS fold | 766 | 886 | IPR013767 | GO:0006355(InterPro) | |
| Enbr6g01462 | 1148 | Pfam | PAS fold | 635 | 748 | IPR013767 | GO:0006355(InterPro) | |
| Enbr6g01462 | 1148 | SUPERFAMILY | ATPase domain of HSP90 chaperone-DNA topoisomerase II-histidine kinase | 982 | 1133 | IPR036890 | - | |
| Enbr6g01462 | 1148 | Gene3D | PAS domain | 622 | 763 | - | - | |
| Enbr6g01462 | 1148 | FunFam | Phytochrome | 628 | 759 | - | - | |
| Enbr6g01462 | 1148 | CDD | HATPase-Phy-like | 1019 | 1132 | IPR044767 | - | |
| Enbr6g01462 | 1148 | SMART | pas-2 | 634 | 700 | IPR000014 | - | |
| Enbr6g01462 | 1148 | SMART | pas-2 | 764 | 835 | IPR000014 | - | |
| Enbr6g01462 | 1148 | SUPERFAMILY | GAF domain-like | 199 | 407 | - | - | |
| Enbr6g01462 | 1148 | Pfam | PAS fold | 71 | 186 | IPR013654 | GO:0006355(InterPro) | |
| Enbr6g01462 | 1148 | Gene3D | - | 200 | 571 | IPR029016 | - | |
| Enbr6g01462 | 1148 | ProSiteProfiles | Phytochrome chromophore attachment site domain profile. | 219 | 400 | IPR016132 | - | |
| Enbr6g01462 | 1148 | ProSiteProfiles | PAS repeat profile. | 762 | 817 | IPR000014 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enbr6g01462 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Enbr | Enbr-Chr5:38517913 | Enbr6g01462 | Enbr-Chr6:50434662 | dispersed | |
| Enbr | Enbr-Chr6:50434662 | Enbr7g00911 | Enbr-Chr7:30538594 | dispersed | |
| Enbr | Enbr-Chr6:50434662 | Enbr8g03354 | Enbr-Chr8:108384022 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Enbr1g05199 | . | 26 | 1079 | Histidine Kinase gene family | AT2G18790 | 75.45 | 0.0 | 1683.0 | |
| Enbr3g00400 | . | 27 | 1197 | Histidine Kinase gene family | AT2G17820 | 62.972 | 0.0 | 1476.0 | |
| Enbr8g03354 | . | 5 | 659 | Histidine Kinase gene family | AT5G10720 | 65.564 | 0.0 | 859.0 | |
| Enbr8g02300 | . | 534 | 614 | Histidine Kinase gene family | AT5G10720 | 76.543 | 5.01e-36 | 127.0 | |
| Enbr7g03345 | . | 15 | 1120 | Histidine Kinase gene family | AT2G47430 | 34.089 | 2.98e-178 | 548.0 | |
| Enbr9g00067 | . | 119 | 196 | Histidine Kinase gene family | AT2G01830 | 61.538 | 4.99e-25 | 95.1 | |
| Enbr5g02791 | . | 583 | 637 | Histidine Kinase gene family | AT1G09570 | 45.455 | 2.14e-06 | 49.7 | |
| Enbr1g00106 | . | 583 | 637 | Histidine Kinase gene family | AT1G09570 | 45.455 | 3.28e-06 | 49.7 | |
| Enbr9g00788 | . | 22 | 602 | Histidine Kinase gene family | AT2G17820 | 67.508 | 0.0 | 827.0 | |
| Enbr5g01188 | . | 585 | 687 | Histidine Kinase gene family | AT1G09570 | 38.835 | 6.81e-10 | 61.2 | |
| Enbr1g07058 | . | 148 | 1056 | Histidine Kinase gene family | AT2G01830 | 69.256 | 0.0 | 1269.0 | |
| Enbr1g02300 | . | 5 | 1096 | Histidine Kinase gene family | AT4G18130 | 60.09 | 0.0 | 1363.0 | |
| Enbr1g03800 | . | 589 | 660 | Histidine Kinase gene family | AT1G09570 | 47.222 | 2.08e-10 | 62.4 | |
| Enbr1g05699 | . | 583 | 637 | Histidine Kinase gene family | AT1G09570 | 45.455 | 1.10e-06 | 50.4 | |
| Enbr5g03037 | . | 608 | 685 | Histidine Kinase gene family | AT1G09570 | 39.744 | 1.83e-07 | 52.4 | |
| Enbr3g02463 | . | 75 | 1120 | Histidine Kinase gene family | AT2G47430 | 35.839 | 0.0 | 572.0 | |
| Enbr1g03946 | . | 129 | 921 | Histidine Kinase gene family | AT5G10720 | 62.239 | 0.0 | 971.0 | |
| Enbr4g01443 | . | 404 | 442 | Histidine Kinase gene family | AT4G16250 | 51.282 | 1.25e-06 | 48.9 | |
| Enbr5g01199 | . | 22 | 1115 | Histidine Kinase gene family | AT2G18790 | 74.547 | 0.0 | 1737.0 | |
| Enbr9g00715 | . | 22 | 780 | Histidine Kinase gene family | AT2G17820 | 66.235 | 0.0 | 1060.0 | |
| Enbr7g00578 | . | 583 | 637 | Histidine Kinase gene family | AT1G09570 | 45.455 | 5.33e-06 | 49.3 | |
| Enbr5g03535 | . | 583 | 640 | Histidine Kinase gene family | AT1G09570 | 41.379 | 7.56e-06 | 46.2 | |
| Enbr7g00911 | . | 10 | 1120 | Histidine Kinase gene family | AT1G09570 | 73.267 | 0.0 | 1757.0 | |
| Enbr6g01462 | . | 3 | 1110 | Histidine Kinase gene family | AT5G35840 | 59.629 | 0.0 | 1419.0 | |
| Enbr1g03063 | . | 118 | 181 | Histidine Kinase gene family | AT2G01830 | 73.438 | 7.56e-27 | 102.0 |