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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01480 ATGGAGGGGTTAAGCTATGTGACATTTAAGGTTCAGAGTGGCTCAATAAACCCTGCTGCTACTGGTGGTTCTTCTTCTAGATTCAAATCTTTTAAGCCTGCATCAATCCAAATGGACAGTCACAGAACCTGTCTTCCTTGTATTAGAGCTCAGCAGTATGGGACAAAGGATGGGCCTTTAGTTGCTTCTCCAACCAGTGATTCAGTAATTGAAGAACTCAAAAGTAAAGATTGGGAAATAGGGGTATTAAAGGATGAACTAGCTGCAACTCAAGGGATTCGGATTAGAAGGCGACCGGCAACAGGACCTCCTTTGCATTATGTAGGACCTTTTGAGTTTCGGTTGCAGAATGAAGGGAATACACCTAGGAATATCTTAGAGGAAATTGTATGGAACAAGGATGTAGAGGTTACGCAGATGAAAGAGAAATATCCGATATGTTTGTTAAAGAAGGCTCTAGACAACGCACCTCCTTCCAGAGACTTTGTAGGAGCTCTTAAGGGGTCGTATATACGAACAGGATTTCCTGGTTTAATTGCTGAAGTGAAAAAGGCTTCACCAAGTAGAGGTGTTCTAAGGGAAGATTTTCATCCTGTTGAGATAGCAAAAGCTTATGAGAAAGGTGGAGCAGCATGCCTAAGTGTTTTGACCGATTCGAAATATTTTCAGGGAAGCTTTGAGAATCTAGAGGCTATACGGAGTGCAGGAGTCAAGTGCCCTCTTTTGTGCAAAGAGTTCATTGTGGATGCATGGCAGTTGTATTATGCACGAACAAAGGGTGCTGATGCTGTTCTGTTAATTGCAGCTGTTTTACCAGATCTTGACATCAGATATATGCTTAAGATATGCAAATTGATTGGACTGACGGCCCTTGTTGAGGTCCATGATGAGAATGAAATGGATCGCATGCTAGGAATTGATGGAATTGAACTTATTGGCATCAACAATCGCAACCTAGCAACATTTGAAGTCGACATTAGCAACACAAAGAAGTTGCTCGAAGGTGAGCGTGGAGAGAAGATCCGGCAGAAAGACATAATAGTGGTCGGGGAGTCCGGGCTGTTTACTCCTGCTGACATTTCATATGTAAAGGAAGCTGGTGTGAAAGCGATTTTGGTCGGTGAGTCGATTGTGAAGCAGAAAGATCCAAGAAAAGGAATTAGTGAACTTTTTGGAAAAGATATATCAGCTTAG 1194 42.29 MEGLSYVTFKVQSGSINPAATGGSSSRFKSFKPASIQMDSHRTCLPCIRAQQYGTKDGPLVASPTSDSVIEELKSKDWEIGVLKDELAATQGIRIRRRPATGPPLHYVGPFEFRLQNEGNTPRNILEEIVWNKDVEVTQMKEKYPICLLKKALDNAPPSRDFVGALKGSYIRTGFPGLIAEVKKASPSRGVLREDFHPVEIAKAYEKGGAACLSVLTDSKYFQGSFENLEAIRSAGVKCPLLCKEFIVDAWQLYYARTKGADAVLLIAAVLPDLDIRYMLKICKLIGLTALVEVHDENEMDRMLGIDGIELIGINNRNLATFEVDISNTKKLLEGERGEKIRQKDIIVVGESGLFTPADISYVKEAGVKAILVGESIVKQKDPRKGISELFGKDISA 397
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01480 397 FunFam Indole-3-glycerol phosphate synthase chloroplastic 118 396 - -
Enbr6g01480 397 Hamap Indole-3-glycerol phosphate synthase [trpC]. 124 392 IPR013798 GO:0004425(InterPro)
Enbr6g01480 397 ProSitePatterns Indole-3-glycerol phosphate synthase signature. 178 196 IPR001468 GO:0004425(InterPro)|GO:0006568(InterPro)
Enbr6g01480 397 PANTHER TRYPTOPHAN BIOSYNTHESIS PROTEIN 64 393 IPR045186 GO:0000162(PANTHER)|GO:0004425(PANTHER)|GO:0004425(InterPro)|GO:0004640(PANTHER)
Enbr6g01480 397 Pfam Indole-3-glycerol phosphate synthase 126 390 IPR013798 GO:0004425(InterPro)
Enbr6g01480 397 SUPERFAMILY Ribulose-phoshate binding barrel 133 392 IPR011060 -
Enbr6g01480 397 CDD IGPS 162 390 IPR013798 GO:0004425(InterPro)
Enbr6g01480 397 Gene3D Aldolase class I 118 396 IPR013785 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01480 K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
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Event-related genes

Select Gene_1 Gene_2 Event_name
86993 Enbr4g01293 Enbr6g01480
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr4:43353822 Enbr6g01480 Enbr-Chr6:50831514 dispersed
Enbr Enbr-Chr6:50831514 Enbr1g01716 Enbr-Chr1:47944220 transposed