AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01485 ATGACTCGTATGAATAATATACATAAGGTTAAGAACAAAAATCCCGCACCTGTTCAAATCACAGCAGAACAGATTATACGTGAAGCAAGACAACTCCATGAAGAAGAACTCGATCTATATCGCCGACGACCAAATTCTACCATCTATGACCTTGAGGAACTCGAAGACTATCGTTTTTGTAAACGTAAAGAATTCGAAGACAGTATTCGAAGTAGTAAAGCAAGGTATAACAAAAACGTGTGGGTCAAGTATGCAAATTGGGAGGAGCGGCAAAAGGCTTTTGATCGTGCACGATCCGTGTGGGAACGAGTTCTTGATGTTGATTCCAAAGATCATAATATTTGGTTAAAGTATGCCGATTTCGAGATAAGAAATAAGTTTGTTAACCATGCAAGAAACGTGTTGGATCGAGCAGTTATGTTGTTGCCTAGAGTTGATGCGCTGTGGCATAAGTATATTCGATTGGAGCAAACTTTAGGTCACGATGCTGGAGCAAGGATGATATCTGAAAGTTATGTAATCTTGTTTAAACAGCAAGAAATTCTGAATTCAGAATTTACAGAGCCCAGGATGCAGGGACGTGGGAATAGGGGTGGCCGTAGGAATTACTCATCTGGTCACATTTCAAATGGTGAAAGTGGTGGCACGAAATCACTTTTTGTACAGGCAATTGAAATTAATCAAGGTGCAGAAAATGGTCCAAATATCCGCCTATGCCTCAGGGTCAAAAGAATAAAGAAAAGATTGTGGCTAGAAGGCCTTACTGTTAAGGCAAGTAAGGGCCTTACTGTTGGCATTGAGTCCGGTAGCACACATGTACCCTTCATGTTGAGTTCCAACAACGTACCAGCTTCTAAGATGTTATCACCTTCACCTGGGGTTGGTCTGCCTGATTCAGATCCTATTCTGATGCCTTCACAAGATTCACGGCTTCCTGTGGGTACAATCAGAAGTGAAGTTGGGAGTCAACAAAGTCGTGTTGACCAAATTACTGCAACCCCCCATGAGATCAAATCACTTACATCTGGTTCTGAGGTTGGAAACTCCACCTTGCAAGGATCTTCTCATGTTCCCTTTTCCATCCCGAAGCCTTCTTCAAACTATAATAATAGGCCGCAACAAGCAATTGGGCCACAAAAAGCAATTGGTTCAAGTATGAAATGGAAACTGAAACCAACAAACAGTGTTCTTGCTCAAGGGGCCATCTCAAAGGAGACAATTAAGCCAGTGGGACTTCCTGTTGAAGTTTTCATTCCAACCCTGTCTGCATCCAGTAATGTTGATTCAAAGGATGGTACTAGTGGACTCGTTTCAGATGGTCAACACGATATTATTCCAAATCACCTTGCTGTCCCCGAAGCCGAGAAACTTAGATATCAAAATGCTTTCTCAACTGGTGATGAAGGAGATCCTATTGACCGTCAAACATGCTCTAGCCATCAATACCCAGCTGTTCAAACATCTCCTAACTTCAGTTTTGGCTTCATGCCACCAATGATTGGCTGCCACCTCACATCTTTTGAAAGCATCGAGTCTCAGGGAAGTGATGGTTTGCAGGTCCCTAGCTTTGTAGTTGGGAACTCACAAATGTTGCCTGGTGCTGGTCCAACTTCGATAGGCACCAAACAACCTGGTGGGGTTATGCAAAGCTCCATAGCTATGACTCAACAATCATTACCCGGTTTCAGGCAGCAAGCTCGGGTTCACTTACCCCATTTCCCTCCAAATTATATCCCATACGGTTCATATTTCCCCCCATTTTATATCCCTCCTCCAGCTATCCATTAA 1788 42.95 MTRMNNIHKVKNKNPAPVQITAEQIIREARQLHEEELDLYRRRPNSTIYDLEELEDYRFCKRKEFEDSIRSSKARYNKNVWVKYANWEERQKAFDRARSVWERVLDVDSKDHNIWLKYADFEIRNKFVNHARNVLDRAVMLLPRVDALWHKYIRLEQTLGHDAGARMISESYVILFKQQEILNSEFTEPRMQGRGNRGGRRNYSSGHISNGESGGTKSLFVQAIEINQGAENGPNIRLCLRVKRIKKRLWLEGLTVKASKGLTVGIESGSTHVPFMLSSNNVPASKMLSPSPGVGLPDSDPILMPSQDSRLPVGTIRSEVGSQQSRVDQITATPHEIKSLTSGSEVGNSTLQGSSHVPFSIPKPSSNYNNRPQQAIGPQKAIGSSMKWKLKPTNSVLAQGAISKETIKPVGLPVEVFIPTLSASSNVDSKDGTSGLVSDGQHDIIPNHLAVPEAEKLRYQNAFSTGDEGDPIDRQTCSSHQYPAVQTSPNFSFGFMPPMIGCHLTSFESIESQGSDGLQVPSFVVGNSQMLPGAGPTSIGTKQPGGVMQSSIAMTQQSLPGFRQQARVHLPHFPPNYIPYGSYFPPFYIPPPAIH 595
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01485 595 Gene3D Tetratricopeptide repeat domain 21 227 IPR011990 GO:0005515(InterPro)
Enbr6g01485 595 SUPERFAMILY TPR-like 73 171 IPR011990 GO:0005515(InterPro)
Enbr6g01485 595 MobiDBLite consensus disorder prediction 189 211 - -
Enbr6g01485 595 Pfam HAT (Half-A-TPR) repeat 94 122 IPR003107 GO:0006396(InterPro)
Enbr6g01485 595 PANTHER FLOCCULATION PROTEIN (DUF1296) 526 595 IPR044277 GO:0051082(PANTHER)
Enbr6g01485 595 SMART hat-new-1 92 124 IPR003107 GO:0006396(InterPro)
Enbr6g01485 595 SMART hat-new-1 126 158 IPR003107 GO:0006396(InterPro)
Enbr6g01485 595 SMART hat-new-1 56 90 IPR003107 GO:0006396(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01485 K12869 crooked neck
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Event-related genes

Select Gene_1 Gene_2 Event_name
87127 Enbr6g01485 Enbr8g00682
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr3:120540133 Enbr6g01485 Enbr-Chr6:50935038 dispersed
Enbr Enbr-Chr3:120592387 Enbr6g01485 Enbr-Chr6:50935038 dispersed
Enbr Enbr-Chr6:50935038 Enbr8g00682 Enbr-Chr8:19917005 dispersed
Enbr Enbr-Chr6:50922942 Enbr6g01485 Enbr-Chr6:50935038 tandem