AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enbr6g01736 | ATGGAGGTAACGAATGTGACAGAGTACCAGGCAATTGCCAAGGAGAAGTTGCCAAAGATGGTGTATGACTACTATGCATCTGGTGCCGAGGACCAATGGACGCTGGAAGAGAACAGAAATGCTTTTGCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAGATTGACATGACCACAACCATTTTGGGGTTCAAAATATCTATGCCCATAATGATCGCCCCAACGGCTATGCAAAAGATGGCTCACCCTGAAGGTGAATATGCAACAGCTAGAGCTGCATCTGCAGCTGGGACTATTATGACGCTGTCATCATGGGCAACATCAAGTGTTGAGGAGGTTGCATCAACAGGACCTGGGATCCGCTTCTTCCAGCTTTATGTGTACAAGGACCGCAATGTTGTGGCTCAACTTGTGAGAAGAGCTGAAAGAGCCGGGTTCAAAGCCATAGCTCTAACAGTTGACACACCGCGACTAGGACGTCGAGAAGCTGACATCAAAAACAGGTTTACTTTACCCCCATTTTTGACACTGAAGAACTTTGAGGGTCTGGACCTTGGCAAGATGGATGAAGCTAACGACTCTGGATTAGCTTCTTATGTTGCTGGTCAGATTGACCGAACTTTGAGCTGGAAGGATGTGCAATGGCTTCAAACAATCACTACAATGCCAATCCTTGTGAAGGGTGTGATCACTGCTGAGGATACAAGGTTAGCTATTCAAGCTGGAGCTGCGGGGATTATTGTATCCAACCATGGAGCTCGTCAACTTGACTATGTCCCTGCAACTATCATGGCTTTAGAGGAGGTTGTGAAAGCTGCACAAGGCCGTGTACCTGTATTCTTGGACGGTGGTGTGCGGCGTGGTACAGATGTTTTCAAGGCACTGGCACTTGGAGCTTCCGGCATATTTATTGGGCGGCCTGTGGTCTTTTCATTGGCTGCTGAAGGAGAAGCTGGAGTAAAGAAAGTGCTTCAAATGTTACGTGATGAGTTTGAGCTAACCATGGCATTAAGTGGTTGTACCTCACTCAAACAGATTACCCGGAACCACATTGTAACCGAGTGGGATGCTCCACGGACTCGTCCTGCACCTAGGTTATAG | 1110 | 47.39 | MEVTNVTEYQAIAKEKLPKMVYDYYASGAEDQWTLEENRNAFARILFRPRILIDVSKIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITTMPILVKGVITAEDTRLAIQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVKKVLQMLRDEFELTMALSGCTSLKQITRNHIVTEWDAPRTRPAPRL | 369 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enbr6g01736 | 369 | PIRSF | Al-hdrx-acd-dh | 1 | 359 | IPR012133 | GO:0010181(InterPro)|GO:0016491(InterPro) | |
| Enbr6g01736 | 369 | Pfam | FMN-dependent dehydrogenase | 13 | 355 | IPR000262 | GO:0016491(InterPro) | |
| Enbr6g01736 | 369 | ProSiteProfiles | FMN-dependent alpha-hydroxy acid dehydrogenase domain profile. | 1 | 359 | IPR037396 | - | |
| Enbr6g01736 | 369 | SUPERFAMILY | FMN-linked oxidoreductases | 2 | 356 | - | - | |
| Enbr6g01736 | 369 | CDD | alpha-hydroxyacid-oxid-FMN | 8 | 351 | IPR012133 | GO:0010181(InterPro)|GO:0016491(InterPro) | |
| Enbr6g01736 | 369 | PANTHER | S -2-HYDROXY-ACID OXIDASE-RELATED | 2 | 353 | - | GO:0005777(PANTHER)|GO:0008891(PANTHER) | |
| Enbr6g01736 | 369 | Gene3D | Aldolase class I | 1 | 369 | IPR013785 | - | |
| Enbr6g01736 | 369 | ProSitePatterns | FMN-dependent alpha-hydroxy acid dehydrogenases active site. | 252 | 258 | IPR008259 | GO:0016491(InterPro) | |
| Enbr6g01736 | 369 | FunFam | peroxisomal (S)-2-hydroxy-acid oxidase GLO1 | 1 | 366 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enbr6g01736 | K11517 | (S)-2-hydroxy-acid oxidase [EC:1.1.3.15] | ||||
| Enbr6g01736 | K00101 | L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Enbr | Enbr-Chr1:276547116 | Enbr6g01736 | Enbr-Chr6:61252395 | dispersed | |
| Enbr | Enbr-Chr3:110431433 | Enbr6g01736 | Enbr-Chr6:61252395 | dispersed | |
| Enbr | Enbr-Chr4:61404 | Enbr6g01736 | Enbr-Chr6:61252395 | dispersed | |
| Enbr | Enbr-Chr4:85576 | Enbr6g01736 | Enbr-Chr6:61252395 | dispersed | |
| Enbr | Enbr-Chr4:43965141 | Enbr6g01736 | Enbr-Chr6:61252395 | dispersed | |
| Enbr | Enbr-Chr4:107222224 | Enbr6g01736 | Enbr-Chr6:61252395 | dispersed | |
| Enbr | Enbr-Chr6:61252395 | Enbr8g00701 | Enbr-Chr8:20256964 | dispersed |