AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01746 ATGACTTCTTCTACTACTTCTATTTCTACTCAAAATTGGGCTAATACACAAACCAAATTTTTACCTTCTTCTACACAAGATGTTTTTGGTTCATTTTCAACATCTTCTATTTCTTTTAACCAAAAACCAAGTTCTAGAATTGCTTGTGCACTTCAAACACCTTCAATTCTTCAAATTCCAAAACAAACACCTAAGAAAAACTCAATAGAATTACCATCTTTCACTTCTTTGCCACAAGTCCCAAAAAATTGGAACTTTTTACAAACATTTGCAGCAATGGCATTGGATGCCATTGAAGATGGCATTAAAGATAAAGAAAGATTACACCCTTTACCGAAAACAGCCGACCCAGAAGTTCAGATCGCCGGAAATTTTGCTCCGGTGCCGGAACAGCCCGTAAGAAAATCTTTACCCGTGGCCGGAAAAATCCCGGAACATATACAAGGTGTTTATTTACGAAACGGTGCAAACCCATTATTCGAACCGACTTCGGGCCATCATTTGTTTGATGGTGACGGCATGATTTATGCCGTGAAGTTGGAAAATGGGTCAGCAAGTTATGCTTGTCGGTTTACTGAAACCCAACGGCTCGTCCAGGAACGAGCCATTGGGAAACCGGTTTTCCCCAAAGCAATTGGGGAATTACATGGGCATTCTGGGATAGCCAAATTGCTATTGTTTTATGCACATGATTTGCCATATCATGTTCGTGTTACACCTTCTGGCGATTTAAAAACCGCTGGAAGGTATAACTTTGATGGTCAACTTGAGTCAACTATGATTGCTCACCCGAAACTGGACCCAGTTTCGGGTGAGCTGTTTGCACTCAGCTACGATGTTATTCAAAAACCATACTTGAAGTACTTTCGATTTTCACCTGATGGCAAAAAATCAAAAGATGTTGCTATTGATTTGGGGAAGCCTACGATGGTACATGATTTTGCAATCACGGAGAATTTTGTAGTTGTGCCAGATCATCAAGTTGTTTTCAAGATGTCCGAAATGATCACGGGCGGGTCGCCCGTGGTGTACGATAAAGAGAAAGTGTCGCGGTTTGGTGTACTTGATAAATATGCGGAAGATGGGTCGGGTATTAAATGGGTTGAAGTTCCGGATTGTTTTTGTTTTCATTTATGGAATGCGTGGGAAGAACCCGAACACGACGAGGTTGTCGTGATCGGGTCCTGCATGACTCCCGCGGATTCCATTTTTAATGAATGCAACGAGGAGTTAAAATCTGTTTTGTCCGAAATTCGTTTGAATTTAAAAACAGGGAAATCGACACGTAAGGCAATAATTGCGCCTGAAAACGACGTTAACTTGGAAGCAGGAATGGTGAACAAAAACCTTTTGGGCCGCAAATCGCAATTTGCATATCTTGCAATAGCCGAGCCTTGGCCAAAGGTGTCTGGTTTCGCCAAAGTTGATCTTTCAACCGGCGAAACCAAAAAGTTTATTTATGGGGAAGAAAAATATGGTGGGGAACCACTTTTTCTTCCTCGAGACTCCCTCTCTGACAGAGAGGACGACGGCCACATTTTAGCCTACGTCCACGACGAAAAAACATGGGAATCAGAACTCCAAATCGTGAATGCCATGACAATGGAACTAGAAGCGACGGTCAAGTTACCATCCCGTGTTCCATACGGCTTTCACGGCACGTTTATTAGTGCGAAAGATTTGGCAACTCAGGCTTAG 1698 42.34 MTSSTTSISTQNWANTQTKFLPSSTQDVFGSFSTSSISFNQKPSSRIACALQTPSILQIPKQTPKKNSIELPSFTSLPQVPKNWNFLQTFAAMALDAIEDGIKDKERLHPLPKTADPEVQIAGNFAPVPEQPVRKSLPVAGKIPEHIQGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKLENGSASYACRFTETQRLVQERAIGKPVFPKAIGELHGHSGIAKLLLFYAHDLPYHVRVTPSGDLKTAGRYNFDGQLESTMIAHPKLDPVSGELFALSYDVIQKPYLKYFRFSPDGKKSKDVAIDLGKPTMVHDFAITENFVVVPDHQVVFKMSEMITGGSPVVYDKEKVSRFGVLDKYAEDGSGIKWVEVPDCFCFHLWNAWEEPEHDEVVVIGSCMTPADSIFNECNEELKSVLSEIRLNLKTGKSTRKAIIAPENDVNLEAGMVNKNLLGRKSQFAYLAIAEPWPKVSGFAKVDLSTGETKKFIYGEEKYGGEPLFLPRDSLSDREDDGHILAYVHDEKTWESELQIVNAMTMELEATVKLPSRVPYGFHGTFISAKDLATQA 565
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01746 565 Pfam Retinal pigment epithelial membrane protein 125 557 IPR004294 GO:0016702(InterPro)
Enbr6g01746 565 PANTHER BETA-CAROTENE DIOXYGENASE 109 556 IPR004294 GO:0009570(PANTHER)|GO:0010436(PANTHER)|GO:0016121(PANTHER)|GO:0016702(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01746 K09840 9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:263764356 Enbr6g01746 Enbr-Chr6:61630204 dispersed