AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01855 ATGTCATCTTTTTCAGTCAAAATTTTCACACCCGATTCATATCTCAACAAGCCCATAACCAATTTCACCTCCACAAGACTATATGCAACACCATCATCACAAACAGCTGCCCCTGCACCAGCTGGTCCAACTCACTCAGTTGGTGATCAGGTTGTTGATAGACTAGAGCCAAGAGTTGAAAAAAAAGATGGTTTTTATGTACTTAAAGAAAAGTTTAGACAAGGTATTAATCCACAAGAAAAAGTTAAGATTGCCAGTGAACCAATGAAGTTGTTTATGGAAAATGGTATTGAAGATCTTGCTAAATTATCATTTGAAGATATTGATAAATCTAAAGATACTAAAGATGATGTTGATGTTAGACTTAAATGGCTTGGTTTGTTTCATAGAAGGAAGCATCAATATGGTCGGTTTATGATGAGGTTGAAGCTCCCAAACGGCGTAACAACAAGTGCCCAAACTCGATACTTAGCTAGTGTAATTAAGCAGTATGGTGAGCAGGGTTGTGCTGATGTTACCACACGCCAAAACTGGCAAATTCGTGGTGTTACACTACCTGATGTACCTGCAATTTTAAATGGTCTTGATGAAGTTGGTTTAACAAGCCTACAAAGTGGTATGGATAATGTCAGGAACCCTGTTGGGAACCCACTTGCAGGGATTGACCCGTATGAGATCGTGGACACGAGGCCTTATACCAACTTATTATCACAATTCATCACTGCCAATTCGAAAGGAAACCCCGAGTTTACTAACTTGCCTAGGAAATGGAATGTGTGTGTCATTGGTTCACATGATCTCTATGAACACCCTCATATCAACGATTTAGCGTACATGCCAGCCACGAAAAATGGCAGATTCGGGTTCAATTTGTTGGTTGGGGGTTTCTTTAGCCCGAAGAGATGTGCTGAGGCTATCCCTCTCGACGCATGGGTCCCAGCTGAAGATGTTATCCCGGTTTGTGGGGCGATTCTTGAGGCTTATCGTGATCTCGGTACCAGAGGGAATAGGCAAAAGACGAGAATGATGTGGTTGATTGATGAACTGGGTGTAGAAGGGTTCCGCTCTGAAGTGGTGAAGAGAATGCCAGAACAAGCATTGGAGAGAGCATCCTCTGAAGATTTAGTTGACCCAAAATGGGAAAGAAGGGATTACTTTGGTGTGAACCCACAGAAACAAGAGGGCCTCAACTTTGTGGGCCTTCACATTCCTGTTGGTCGGGTCCAAGCCGATGACATGAACGAGTTAGCACGGATAGCCAACGAGTACGGCTCAGGAGAGCTTCGTCTAACGGTGGAACAAAACATCATACTACCAAATGTACCAAACTCAAAAGTTAAAGCTTTGCTTGACGAACCTCTTTTGAAAGAAAAGTTTTTACCCGAGCCACCGATCTTGATGAAAGGGTTAGTGGCTTGCACTGGTAACCAGTTTTGCGGGCAGGCTATTATTGAGACTAAAGCCCGTGCTTTGAAGGTTACAGAAGAAGTGGGAAGACTTGTTTCTGTGACCCGTCCAGTGAGGATGCACTGGACGGGCTGCCCAAACACATGCGGGCAGGTTCAAGTCGCAGATATAGGGTTTATGGGTTGCATGACTAGAGACGAAAACGGAAAGGTTGTTGAAGGAGCTGATGTTTACTTAGGAGGTAGAATTGGAAGTGACTCACATTTGGGTGATATCTATAAAAAGGCTGTTCCTTGTAAGGACTTGGTGCCCTTAGTAGTGGATATCATGGTTGAGAAATTTGGTGCTGTCCCAAGAGATAGAGAAGAAGGTGAAGAATGA 1788 43.46 MSSFSVKIFTPDSYLNKPITNFTSTRLYATPSSQTAAPAPAGPTHSVGDQVVDRLEPRVEKKDGFYVLKEKFRQGINPQEKVKIASEPMKLFMENGIEDLAKLSFEDIDKSKDTKDDVDVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSAQTRYLASVIKQYGEQGCADVTTRQNWQIRGVTLPDVPAILNGLDEVGLTSLQSGMDNVRNPVGNPLAGIDPYEIVDTRPYTNLLSQFITANSKGNPEFTNLPRKWNVCVIGSHDLYEHPHINDLAYMPATKNGRFGFNLLVGGFFSPKRCAEAIPLDAWVPAEDVIPVCGAILEAYRDLGTRGNRQKTRMMWLIDELGVEGFRSEVVKRMPEQALERASSEDLVDPKWERRDYFGVNPQKQEGLNFVGLHIPVGRVQADDMNELARIANEYGSGELRLTVEQNIILPNVPNSKVKALLDEPLLKEKFLPEPPILMKGLVACTGNQFCGQAIIETKARALKVTEEVGRLVSVTRPVRMHWTGCPNTCGQVQVADIGFMGCMTRDENGKVVEGADVYLGGRIGSDSHLGDIYKKAVPCKDLVPLVVDIMVEKFGAVPRDREEGEE 595
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01855 595 Gene3D Sulfite Reductase Hemoprotein, domain 1 199 384 IPR045854 -
Enbr6g01855 595 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 468 579 IPR045854 -
Enbr6g01855 595 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 207 364 IPR045854 -
Enbr6g01855 595 Pfam Nitrite and sulphite reductase 4Fe-4S domain 207 364 IPR006067 GO:0016491(InterPro)|GO:0020037(InterPro)|GO:0051536(InterPro)
Enbr6g01855 595 Pfam Nitrite-Sulfite reductase ferredoxin-like half domain 131 198 IPR005117 GO:0016491(InterPro)
Enbr6g01855 595 Pfam Nitrite-Sulfite reductase ferredoxin-like half domain 390 453 IPR005117 GO:0016491(InterPro)
Enbr6g01855 595 Gene3D - 75 456 - -
Enbr6g01855 595 SUPERFAMILY Nitrite-Sulfite reductase N-terminal domain-like 343 479 IPR036136 GO:0016491(InterPro)
Enbr6g01855 595 SUPERFAMILY Nitrite-Sulfite reductase N-terminal domain-like 55 206 IPR036136 GO:0016491(InterPro)
Enbr6g01855 595 Pfam Nitrite and sulphite reductase 4Fe-4S domain 470 581 IPR006067 GO:0016491(InterPro)|GO:0020037(InterPro)|GO:0051536(InterPro)
Enbr6g01855 595 ProSitePatterns Nitrite and sulfite reductases iron-sulfur-siroheme-binding site. 512 528 IPR006066 GO:0016491(InterPro)|GO:0020037(InterPro)|GO:0051536(InterPro)
Enbr6g01855 595 Gene3D Sulfite Reductase Hemoprotein, domain 1 464 594 IPR045854 -
Enbr6g01855 595 PRINTS Sirohaem Fe-binding site signature 512 530 IPR006066 GO:0016491(InterPro)|GO:0020037(InterPro)|GO:0051536(InterPro)
Enbr6g01855 595 PRINTS Sirohaem Fe-binding site signature 468 486 IPR006066 GO:0016491(InterPro)|GO:0020037(InterPro)|GO:0051536(InterPro)
Enbr6g01855 595 PANTHER FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC 50 593 IPR051329 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01855 K00366 ferredoxin-nitrite reductase [EC:1.7.7.1]