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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01889 ATGAGCATCCATGGCAGTCTTCTTGAAGTCACGGTTGTTAGTTGCAGTAAACTGAAAGATACGGAATGGCTATCAAGGCAAGATCCTTATGTCTGTGTCGAATATGGTAGCAATAGATCTACCACGCGTACCTGTACAGATGGAGGCAAGAACCCTACATTCCAAGAGAAATTTGTGTATTCCCTAGTTGAGGGACTAAGAGAGATCAACGTTGCCGTTTGGAATAGTAATACTGTCACACATGATGATTACATAGGTAGCATAAGGATTCCATTGACAAAGGCTCTTTCTCATGGATTTGATGACAGTACCTGGCCATTACAAAGTAAAACTGGCAGGCATGCTGGAGAGGTTCGATTGATAATGCATTATTCCAATGGCAATGTAAGTTCCAATAATGCTACATTGTTACATTTTGAGCCTTTTACTGCAGAAACTAAACAAATTTGTGGTTTCCATTTCGTTCCTATGTACTCTGCACCACCACCGGCTGCATTTTATCCTCCAACTCCCTACCCATCCTACGCACCTAATTCAGGTGGCTATCCACCGGCTCCATATCCACCTCAGGCAACTACTTATCCTCCGACGCCTTATCCACCTAATCCAGCTTATGGATCCCATTATCCCCATGGTAACTAA 642 43.15 MSIHGSLLEVTVVSCSKLKDTEWLSRQDPYVCVEYGSNRSTTRTCTDGGKNPTFQEKFVYSLVEGLREINVAVWNSNTVTHDDYIGSIRIPLTKALSHGFDDSTWPLQSKTGRHAGEVRLIMHYSNGNVSSNNATLLHFEPFTAETKQICGFHFVPMYSAPPPAAFYPPTPYPSYAPNSGGYPPAPYPPQATTYPPTPYPPNPAYGSHYPHGN 213
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01889 213 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) 7 208 IPR052981 -
Enbr6g01889 213 MobiDBLite consensus disorder prediction 178 213 - -
Enbr6g01889 213 SMART C2-3c 7 104 IPR000008 -
Enbr6g01889 213 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Enbr6g01889 213 SUPERFAMILY C2 domain (Calcium-lipid-binding domain, CaLB) 5 125 IPR035892 -
Enbr6g01889 213 MobiDBLite consensus disorder prediction 178 205 - -
Enbr6g01889 213 Pfam C2 domain 7 98 IPR000008 -
Enbr6g01889 213 CDD C2 8 105 - -
Enbr6g01889 213 Gene3D C2 domain 6 126 IPR035892 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01889 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
86981 Enbr4g01029 Enbr6g01889
87154 Enbr6g01889 Enbr8g00469
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr4:35810552 Enbr6g01889 Enbr-Chr6:66450272 dispersed
Enbr Enbr-Chr6:66450272 Enbr8g00469 Enbr-Chr8:12324612 dispersed
Enbr Enbr-Chr6:66223658 Enbr6g01889 Enbr-Chr6:66450272 proximal