AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g02083 ATGGAAACTCCAGGGTCGAAAAGGTTGTTGAGGAAGAAATCGTTGTCGAAAAGCTATGATGAGAATTTGTTGGATGAGTATTTGGATAGGCAACTAGGTGGGTCGACGAGGAAAAGGTTTAGAACAAAGAAAGAGTTGGAGAAAGAAACGGAAAAAGAAGCGATGATAGCTTTATCGTTAGGGTTTCCGATTGATGCGTTGCTTGAAGAAGAGATTAAGGCAAATGTAGTGAGTAAGTTGGATGGGAAGGAGCAGAATGACTATATTGTGGTGAGAAACCATATATTGTCTAGATGGAGGGCTGATGTTCAAGTGTGGCTTACGAAAGGACAGATAAAGGAAACTGTCAGTAATGAGTATGATCAGTTGTTGAATTCGGCTTATGATTTTCTTTTGAATAATGGGTATATAAATTTTGGGGTTTCGCCGGCATTTAAAGCTAAGATGCCTGAAGAAGCAAACGAGGGTTCTGTGATTATCATTGGTGCAGGGCTTGCTGGGTTAGCTGCTGCTCGCCAGCTTCTAGCTTTTGGTTTTAAGGTGATTGTTTTGGAAGGTAGGGACAGACCTGGGGGTAGAGTTTATACACAAAAGATGGGTAAAGAAGGTAATTATGCTGCGGTTGATCTAGGTGGTAGTGTCATTACAGGCATCCATGCGAACCCGCTTGGAGTATTGGCTAGACAACTTGCGATTCCTCTTCATAAAGTTAGAGATGTATGTCCGTTGTACGATCCAGAAGGGCGGCCTGTGGCCGGTGACGTTGATGCCAAAGTAGAATTTATTTTTAATAGGCTTTTAGACAAAGTTACCGAATTTAGACAAATAATGGGTAAATCAGCCGCTGATATTTCTCTGGGATCTGTTCTTGAGAGGCTTAGACAGATGTATACTGTGGCCACAAAGCCTGATGAAAGACAGTTACTTGACTGGCATTTTGCAAACTTGGAATATGCAAACGCAGGTTGCCTTTCACATCTCTCTGCTGCTTATTGGGATCAAGATGATCCTTATGAAATGGGCGGTGATCATTGCTTTCTTTCAGGCGGGAATTGGAGGTTAATCGAAGCATTGTGTGATGGGGTTCCCATTTTTTATGGAAAAACTGTTCAGACGATTCGGTATGGTGAAGAAGGTGTTGAGGTGACTGCTGGGGACCAAACGTTTCAAGCTGACATGGTGTTATGCACTGTTCCGCTTGGTGTCCTAAAGAAACGATCCATTAAATTCATCCCAGAGTTACCCGTACGAAAACTTGAAGCAATTGAAAGATTGGGATTTGGGTTGCTAAATAAGGTTGCTATGGTATTTCCGCATGTCTTTTGGGGGGAAGAGCTTGATACATTTGGCTGTCTCAGCAAGAATAGCAATACACGTGGCGAGTTTTTCTTGTTCTACAGCTATCATACAGTTTCCGGTGGTTCAGGACTTGTTGCATTGGTTGCCGGTGAAGCTGCAAGATCGTTTGAGCTCACACACCCGTCCACTTTGCTTCATCGTGTTTTAAACATCCTGAGAGGTATATATGGTCCAAAGGGTATTGATGTTCCTGATCCCATCCAATCTATCTGTACTAAATGGGGAAATGATCCTCTTTCTTATGGTTCATATTCTCATGTAAGGGTGCATGCTTCTGGTAGTGATTATGACATACTTGCAGAAAATGTGGAAAACCGGCTTTTCTTTGGTGGTGAAGCCACAAACCGGCAACATCCTGCCACTATGCATGGTGCTTATTTAAGTGGTTTAAGGGAAGCTTCATGTATTTACAGAGTCACAAAGGGTAGTAAACAAACTCATCCTAGGAAAAGCATTCGGAAGATTGTTGGAGTGAGTGATACTCTTGTAAATCTGTTCAAGTATCCGGATTTAGCTATTGGAAACTTCAGTTTTGTGTTTGACCCGTCCAACGAAGACCCTAAATCGAGGGGACTTATGATGGTTACCGTGGAAAGTTCTAGTAGCGAGTTAAGTAATGATAACGGGAAGGTCAACAATGGTCAACATTCTGAGAAGCAACCTGTGAGGCTTTATATGATTGTAACGCGTGCACAGGCACAAGAATTGCAATCGGAGACAGGAGAGCGTGAAAGTGGATTGACATATTTGTTCAAAAATCATGGGTTGAAGGTTATGGGATCAGATAGTTTTGGCCTCTTAGCTAATTCGTTGATTTCCCAGATTGCTACACGTAGAGGGAGGGTAGAAAGTGCGGTCGATTCCTTGTATCCGGAGTTCAGGTCGGTTGATAATCTTGTGGCACGGAATACATCTAGAGTTCTTAAAGCTTTTCAGAATGCCAGGGTTGGAGCTCATCATTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCTGGAGGCCGAGAAGCACTTGATCAAGCGTTTGCGGAAATATTTGGTGCTGAATCTGCTATTGTCCGTTCTCAGTTTTTCTCAGGAACTCATGCTATTACATGTGCCCTTTTTGCTTTCTTGAGGCCTGGCGATGAGCTTTTGGCAGTTGCTGGTGCTCCTTATGATACACTGGAGGAAGTTATAGGAATCAGGGATGGAAATGGATTAGGTTCCCTCAAAGATTTTGGAATCAGTTATCGAGAAGTTGCACTTGCAGATGATGGAGGGCTTGATTGGGGTGCTCTTGAGCTAGCTTTAAAACCTCAAACGAAATGTGCCCTTATTCAAAGATCATGTGGGTATTCTTGGCGTAAAAGCTTAAGTGTAACTGAAATATCAAGGGCAATACAGATGATCAAGATACAAAATCCAAATTGTTTGGTTATGGTGGATAATTGCTATGGTGAATTTACTGAAGCTATTGAACCTCCAATGGTGGGTGCTGATCTTATTGCAGGGAGTTTAATTAAAAACCCTGGTGGAACAATTGCGCCATGTGGTGGATATGTTGCTGGGAAAGAAAAATGGGTAAAGGCGGCAGCAGCTCGTCTCTCTGCACCAGGTCTTGGGGTTGATTGCGGGTCAACTCCTGGTGATATTATGCGGACATTCTTTCAAGGATTATACCTCTCACCTCAAATGGTTGGGGAAGCAATTAAGGGAGGCTTACTGATTGCTGAAGTTATGTCCGCGAAAGGTTACAACGTCCAGCCACTTCCACGAGTACCCCGTCATGACATAGTACAGGCTGTACAACTTGGAAGCCGTGAGAGGCTCCTTGCTTTTTGTGAGGCTGTACAAAGAAGTTCCCCGGTAAGCTCATACACGAAACCAATTGCTGGTTCAACACCTGGTTATGCATCGGAGGTGATCTTTGCTGATGGAACGTTCATAGACGGCAGCACTAGTGAACTCTCGTGTGATGGGCCGTTAAGAGAGCCATTCACTGTGTTCTGTCAGGGTGGCACTCACTGGACTCAGTGGGGATTAGTTCTGGGAGAGGTTTTGAATTCATTGTAA 3414 43.59 METPGSKRLLRKKSLSKSYDENLLDEYLDRQLGGSTRKRFRTKKELEKETEKEAMIALSLGFPIDALLEEEIKANVVSKLDGKEQNDYIVVRNHILSRWRADVQVWLTKGQIKETVSNEYDQLLNSAYDFLLNNGYINFGVSPAFKAKMPEEANEGSVIIIGAGLAGLAAARQLLAFGFKVIVLEGRDRPGGRVYTQKMGKEGNYAAVDLGGSVITGIHANPLGVLARQLAIPLHKVRDVCPLYDPEGRPVAGDVDAKVEFIFNRLLDKVTEFRQIMGKSAADISLGSVLERLRQMYTVATKPDERQLLDWHFANLEYANAGCLSHLSAAYWDQDDPYEMGGDHCFLSGGNWRLIEALCDGVPIFYGKTVQTIRYGEEGVEVTAGDQTFQADMVLCTVPLGVLKKRSIKFIPELPVRKLEAIERLGFGLLNKVAMVFPHVFWGEELDTFGCLSKNSNTRGEFFLFYSYHTVSGGSGLVALVAGEAARSFELTHPSTLLHRVLNILRGIYGPKGIDVPDPIQSICTKWGNDPLSYGSYSHVRVHASGSDYDILAENVENRLFFGGEATNRQHPATMHGAYLSGLREASCIYRVTKGSKQTHPRKSIRKIVGVSDTLVNLFKYPDLAIGNFSFVFDPSNEDPKSRGLMMVTVESSSSELSNDNGKVNNGQHSEKQPVRLYMIVTRAQAQELQSETGERESGLTYLFKNHGLKVMGSDSFGLLANSLISQIATRRGRVESAVDSLYPEFRSVDNLVARNTSRVLKAFQNARVGAHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDGNGLGSLKDFGISYREVALADDGGLDWGALELALKPQTKCALIQRSCGYSWRKSLSVTEISRAIQMIKIQNPNCLVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSAKGYNVQPLPRVPRHDIVQAVQLGSRERLLAFCEAVQRSSPVSSYTKPIAGSTPGYASEVIFADGTFIDGSTSELSCDGPLREPFTVFCQGGTHWTQWGLVLGEVLNSL 1137
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g02083 1137 Gene3D - 158 587 IPR036188 -
Enbr6g02083 1137 SUPERFAMILY Homeodomain-like 49 150 IPR009057 -
Enbr6g02083 1137 Gene3D - 732 782 - -
Enbr6g02083 1137 FunFam Lysine-specific histone demethylase 1A 52 152 - -
Enbr6g02083 1137 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 733 1137 IPR009651 -
Enbr6g02083 1137 SUPERFAMILY PLP-dependent transferases 755 1125 IPR015424 -
Enbr6g02083 1137 Pfam SWIRM domain 69 139 IPR007526 GO:0005515(InterPro)
Enbr6g02083 1137 Pfam Flavin containing amine oxidoreductase 165 589 IPR002937 GO:0016491(InterPro)
Enbr6g02083 1137 Gene3D - 783 991 IPR015421 -
Enbr6g02083 1137 Gene3D - 992 1137 - -
Enbr6g02083 1137 ProSiteProfiles SWIRM domain profile. 47 148 IPR007526 GO:0005515(InterPro)
Enbr6g02083 1137 Gene3D - 53 151 IPR036388 -
Enbr6g02083 1137 Gene3D - 240 545 - -
Enbr6g02083 1137 SUPERFAMILY FAD-linked reductases, C-terminal domain 426 538 - -
Enbr6g02083 1137 SUPERFAMILY FAD-NAD(P)-binding domain 155 591 IPR036188 -
Enbr6g02083 1137 Pfam Methionine gamma-lyase 736 1135 IPR009651 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g02083 K11450 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:1.14.99.66]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:250592756 Enbr6g02083 Enbr-Chr6:73500801 dispersed
Enbr Enbr-Chr1:250680466 Enbr6g02083 Enbr-Chr6:73500801 dispersed
Enbr Enbr-Chr2:151708469 Enbr6g02083 Enbr-Chr6:73500801 dispersed
Enbr Enbr-Chr5:20666071 Enbr6g02083 Enbr-Chr6:73500801 dispersed
Enbr Enbr-Chr6:73500801 Enbr6g02892 Enbr-Chr6:106614951 dispersed
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Enbr Amino_oxidase 5.6e-82 CL0063 TR SWI/SNF-SWI3