AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g02209 TGGGAGGATCGATTGCAGAGGGGACTTTTTCGCTATGATGTAACTGCCTGCGAAACCAAGGTGATTCCAGGTAAACATGGGTTTATTGCTCAGCTGAACGAGGGCCGTCACCTCAAGAAACGTCCAACCGAGTTCCAAGTCGATAAGGTCCTGCAGCCCTTTGATGAGAACAAGTTCAACTTTACCAAAGTAGGCCAGGAGGAGGTGCTCTTCCAGTTTGAACCAAGCGGTGACAGTGAAGTTCACTTTTATCCAAACGCTCCGATCGATGTGGACAAATCACCAAGTGTTGTTGCTATCAATGTTAGCCCCATTGAATATGGTCATGTGCTTCTGATTCCTCGAATTCTCGAACGCTTACCTCAAAGGATTGACCACGAGAGCTTAGAGCTTGCTCTGTACATGGCACGTGAGGCTGGAAGTCCGTACTTTCGTCTTGGGTACAATAGCTTGGGTGCATTTGCTACTATCAATCACCTACACTTCCAGGCCTACTACTTGGCTGTGCCATTTCCGATTGAGAAGGCAGTAACTAAAAAGATTACCGCTTTTAATGCTAGGGTCGAGATCTCTGAGATTCTCAACTATCCTGTAAGAGGTCTCGTCTTTGAGGGTGGAAATTCTGTTGAAGAACTATCCAAGGGTGTGGCAGACACCTGCATATGCCTTCAAGATAACAACATACCTTACAATGTACTCATCTCAGAATGTGGTAGACGCATCTTTGTTCTTCCACAGTGTTATGCAGAGAAGCAGGCTTTGGGAGAAGTGAATGCTGAGCTTCTAGATACTCAGGTGAACCCTGCTGTGTGGGAAATCAGTGGACACATGGTGTTGAAAAGGAAGGAGGACTATGAAGGGGCATCTGAGCAAAAAGCTTGGAGACTTCTTGCAGAGGTTTCTTTGTCTGAAGAAAGGTTTCAAGAAGTGATAGCCATTATCTTTGAGGCCATCTCATGTGCTGTTATTGAGAAGAAATTGGCCGAGGATGAGGTACTAGAAGTTGCTGCTGAAAGTGGTGTTAGCCCCCATGCAGGTATCGTGACTGGGAAGCACGAATGCCTATTGCCGGCAAGCGGCTGTCTTTTCGCATTCCGGCCGGAAACTTCTTCTTCGACTATTCCGAGGTGGTATCTACTTGACACAATGTCTTCTGCGATGTTTTCTACGTTGCGTGGCACCGCACTAGCTTTTGATCAAAGAAAGAACTTTGCTGATGATTCCGTTAAGTCCGGTTTCTTGAGTAAAAAACAGACACTGCATTTCAAGAGGAACTATCTGTCAGCTTATAGTCAAAGGCTGGATAGAATCCAATGTAGGGCGTTAGAGGTGGAAACTGTTCAAACGTTTTTGAAGGGAGACAAATTTCAACTACATGATGTTATTGAAGCACAACAATTTGATAGAGATATACTCAGTGCAGTATTTGAAGTTGCACGTGAAATGGAAACCATTGAGAAGAAGTCTCATGGAAGCCAGATTCTCAATGGTTTCTTAATGTCTACTCTCTTTTACGAGCCGTCCACTAGGACTAGGCTTTCATTTGAGTCGGCAATGAAAAGGTTAGGTGGTGAAGTGTTGACAACGGAAAACGCACGAGAGTTCTCTTCTGCTGCAAAAGGAGAAACACTGGAAGATACAATTAGAACCGTGGAAGGTTATTCAGATATAATCGTGATGAGGCACTTTGAAAGTGGTGCGGCTAGAAGAGCAGCACTGGCAGCTAACATTCCTGTTATTAATGCCGGTGACGGGCCAGGTCAGCATCCTACCCAGGCTCTTCTTGATGTGTACACTATTGAAAGAGAGATAGGAAAGCTGGATGGGATTAAGGTTGCACTTGTTGGGGATCTTGCTAACGGCCGAACAGTTCGTTCCCTTGCATATCTTTTAGCCAAATATAATAACGTGAAGATTTACTTTGTTTCACCTGAGGTTGTAAAGATGAAGGAGGACATTAAAGAGTACTTAACATCAAAGGGAGTGGAATGGGAAGAAAGTGCAGATCTAAAGGAAGTAGCATTAAAGTGTGATGTGGTGTACCAAACCCGCATACAGAGAGAGCGTTTTGGTGAGAGAACTGATCTTTATGATGCAGCCCGTGGCAAATACATTATTGATCGTGATGTCTTGGCTGTCATGCAGAAGCATGCTGTTGTCATGCATCCTCTCCCAAGGCTTGATGAGATAACGGTGGATGTAGATGAGGATCCTAGGGCTGCCTACTTTAGACAAGCAAAAAATGGACTCTTCATTAGAATGGCTTTGTTGAAGCTCTTACTTCTTGGTTGGTGA 2295 44.62 WEDRLQRGLFRYDVTACETKVIPGKHGFIAQLNEGRHLKKRPTEFQVDKVLQPFDENKFNFTKVGQEEVLFQFEPSGDSEVHFYPNAPIDVDKSPSVVAINVSPIEYGHVLLIPRILERLPQRIDHESLELALYMAREAGSPYFRLGYNSLGAFATINHLHFQAYYLAVPFPIEKAVTKKITAFNARVEISEILNYPVRGLVFEGGNSVEELSKGVADTCICLQDNNIPYNVLISECGRRIFVLPQCYAEKQALGEVNAELLDTQVNPAVWEISGHMVLKRKEDYEGASEQKAWRLLAEVSLSEERFQEVIAIIFEAISCAVIEKKLAEDEVLEVAAESGVSPHAGIVTGKHECLLPASGCLFAFRPETSSSTIPRWYLLDTMSSAMFSTLRGTALAFDQRKNFADDSVKSGFLSKKQTLHFKRNYLSAYSQRLDRIQCRALEVETVQTFLKGDKFQLHDVIEAQQFDRDILSAVFEVAREMETIEKKSHGSQILNGFLMSTLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAALAANIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVALVGDLANGRTVRSLAYLLAKYNNVKIYFVSPEVVKMKEDIKEYLTSKGVEWEESADLKEVALKCDVVYQTRIQRERFGERTDLYDAARGKYIIDRDVLAVMQKHAVVMHPLPRLDEITVDVDEDPRAAYFRQAKNGLFIRMALLKLLLLGW 764
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g02209 764 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 1 320 IPR026506 GO:0005737(PANTHER)|GO:0006006(PANTHER)|GO:0080048(InterPro)|GO:0080048(PANTHER)
Enbr6g02209 764 FunFam Aspartate carbamoyltransferase 460 592 - -
Enbr6g02209 764 NCBIfam aspartate carbamoyltransferase 460 761 IPR002082 GO:0004070(InterPro)|GO:0006207(InterPro)
Enbr6g02209 764 PRINTS Aspartate-ornithine carbamoyltransferase superfamily signature 726 749 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 PRINTS Aspartate-ornithine carbamoyltransferase superfamily signature 589 600 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 PRINTS Aspartate-ornithine carbamoyltransferase superfamily signature 504 523 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 PRINTS Aspartate-ornithine carbamoyltransferase superfamily signature 716 725 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 Gene3D Aspartate-ornithine carbamoyltransferase 589 748 IPR036901 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 ProSitePatterns Aspartate and ornithine carbamoyltransferases signature. 504 511 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 FunFam Aspartate carbamoyltransferase 2 593 748 - -
Enbr6g02209 764 Pfam Aspartate-ornithine carbamoyltransferase, Asp-Orn binding domain 608 759 IPR006131 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 Hamap Aspartate carbamoyltransferase [pyrB]. 458 763 IPR002082 GO:0004070(InterPro)|GO:0006207(InterPro)
Enbr6g02209 764 SUPERFAMILY Aspartate-ornithine carbamoyltransferase 457 761 IPR036901 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 Gene3D Aspartate-ornithine carbamoyltransferase 461 757 IPR036901 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Enbr6g02209 764 PRINTS Aspartate carbamoyltransferase signature 534 543 - -
Enbr6g02209 764 PRINTS Aspartate carbamoyltransferase signature 742 756 - -
Enbr6g02209 764 PRINTS Aspartate carbamoyltransferase signature 720 725 - -
Enbr6g02209 764 PRINTS Aspartate carbamoyltransferase signature 588 605 - -
Enbr6g02209 764 PRINTS Aspartate carbamoyltransferase signature 680 689 - -
Enbr6g02209 764 PRINTS Aspartate carbamoyltransferase signature 494 516 - -
Enbr6g02209 764 Pfam Aspartate-ornithine carbamoyltransferase, carbamoyl-P binding domain 460 601 IPR006132 GO:0006520(InterPro)|GO:0016743(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g02209 K14190 GDP-L-galactose phosphorylase [EC:2.7.7.69]
Enbr6g02209 K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:304540413 Enbr6g02209 Enbr-Chr6:78594529 dispersed
Enbr Enbr-Chr1:304562068 Enbr6g02209 Enbr-Chr6:78594529 dispersed