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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g02210 ATGTCTGGAAACGAAGAAGACAAGAAGCCAGCCGCCGCCGCTGGAGGCGAACACATCAATCTCAAAGTTAAAGGCCAGGATGGGAATGAAGTGTTTTTCAGGATTAAGCGTAGCACCCAGCTTAAGAAGTTAATGAACGCATACTGTGATCGTCAATCTGTGGAGCTCAACTCCATTGCTTTCTTATTTGACGGCCGCCGCCTTCGTGCTGAGCAGACTCCTGATGAGTTGGAAATGGAGGAGGGGGATGAGATAGATGCTATGCTGCACCAGACAGGGGGTGGCGTTGACTTCTGA 297 50.17 MSGNEEDKKPAAAAGGEHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELEMEEGDEIDAMLHQTGGGVDF 98
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g02210 98 MobiDBLite consensus disorder prediction 1 20 - -
Enbr6g02210 98 Gene3D - 1 94 - -
Enbr6g02210 98 PANTHER SMALL UBIQUITIN-RELATED MODIFIER 8 94 - GO:0005634(PANTHER)|GO:0016925(PANTHER)|GO:0031386(PANTHER)|GO:0044389(PANTHER)
Enbr6g02210 98 SUPERFAMILY Ubiquitin-like 4 95 IPR029071 -
Enbr6g02210 98 FunFam Small ubiquitin-related modifier 1 94 - -
Enbr6g02210 98 CDD Ubl-Smt3-like 17 90 - -
Enbr6g02210 98 Pfam Ubiquitin-2 like Rad60 SUMO-like 19 89 IPR022617 -
Enbr6g02210 98 ProSiteProfiles Ubiquitin domain profile. 17 94 IPR000626 GO:0005515(InterPro)
Enbr6g02210 98 SMART ubq-7 19 90 IPR000626 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g02210 K12160 small ubiquitin-related modifier
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Event-related genes

Select Gene_1 Gene_2 Event_name
87158 Enbr6g02210 Enbr8g02654
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:78602045 Enbr8g02654 Enbr-Chr8:86487626 dispersed
Enbr Enbr-Chr1:60759311 Enbr6g02210 Enbr-Chr6:78602045 transposed
Enbr Enbr-Chr4:27034314 Enbr6g02210 Enbr-Chr6:78602045 transposed
Enbr Enbr-Chr8:10102563 Enbr6g02210 Enbr-Chr6:78602045 transposed
Enbr Enbr-Chr6:78602045 Enbr8g02653 Enbr-Chr8:86483874 wgd