Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enbr6g02994 | ATGTTTACTAGTTTCACACCCTTTGGAGGCATGAAATCAAAAATCGTTCCTTACTATATGAACGGAACTCCATCTAGCCTTTTTTGCATCCTGCCACGAGACGATTCTTCACGTTTTTACCCTCCTGGTACCGTTCCTGTTTACCTTAATGTGTATGACATCTCTACTATCAATAATTGTATATCATGGACAGGTCTGGGTGCCTTTCACACCGGTTTAGAAGTTCATGGCGTGGAATATGGTTTTGGATGTCACCAAGAATCAGAAAGTGGTGTCTTTGAAATTGAGCCTCGGAAATGTCCTGGTTTCAAGTTTAGGGAGTCGATTTTTATGGGTACAACAAAGCTAACTTCGAGTCAGGTTCATAGATTCTTTGAGCTGCAGTCTAATAACTACTATGGTGACACATACCACTTATTTGGGAAGAACTGCAACCATTTTTGTGAAGATATGTGTTACCAGTTAACCAGGAACAAAATCCCCAAATGGGTCAACCGGCTTGCCAGACTAGGTTCATGTTGTCGATGCATACTCCCAAAATCCATCAAGGGTTCTGCTGTTAAAAACGAATCAAATGTTTCAGACTATGAAAAGAAGAGTTTGAAAAGTTCATTTAGCTGCTTTTCATCATTTTCGTCACATAATAAGTTGAGGAAAGTGTCGATATCTTCATTGTATAAGCATTCCCTCTACAAAGGATGTCTTCCCCCATGGGAGTTGCGTGTAGACTCACAAAGGCTTTGTGATGAGGATGATGAGTGA | 762 | 40.42 | MFTSFTPFGGMKSKIVPYYMNGTPSSLFCILPRDDSSRFYPPGTVPVYLNVYDISTINNCISWTGLGAFHTGLEVHGVEYGFGCHQESESGVFEIEPRKCPGFKFRESIFMGTTKLTSSQVHRFFELQSNNYYGDTYHLFGKNCNHFCEDMCYQLTRNKIPKWVNRLARLGSCCRCILPKSIKGSAVKNESNVSDYEKKSLKSSFSCFSSFSSHNKLRKVSISSLYKHSLYKGCLPPWELRVDSQRLCDEDDE | 253 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enbr6g02994 | 253 | Gene3D | PPPDE domains | 41 | 199 | IPR042266 | - | |
| Enbr6g02994 | 253 | PANTHER | DESUMOYLATING ISOPEPTIDASE | 44 | 207 | IPR008580 | GO:0008233(InterPro)|GO:0016579(PANTHER)|GO:0070646(PANTHER)|GO:0101005(PANTHER) | |
| Enbr6g02994 | 253 | ProSiteProfiles | PPPDE domain profile. | 45 | 182 | IPR008580 | GO:0008233(InterPro) | |
| Enbr6g02994 | 253 | Pfam | PPPDE putative peptidase domain | 46 | 180 | IPR008580 | GO:0008233(InterPro) | |
| Enbr6g02994 | 253 | SMART | DUF862-2a | 45 | 183 | IPR008580 | GO:0008233(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enbr6g02994 | K22763 | deubiquitinase DESI2 [EC:3.4.19.12] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Enbr | Enbr-Chr6:110028340 | Enbr9g00703 | Enbr-Chr9:33099161 | dispersed | |
| Enbr | Enbr-Chr6:110028340 | Enbr2g03018 | Enbr-Chr2:97804246 | transposed |