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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g02997 ATGGGGAATGATTCAGGTTATGAGAGGACTTGCTATGTAAAGCATGTTGAATGCAACTACTCATGTGATATATCATTGGTGCAGGTTGGTCTGCGATTGCTTCTTTGCCCACTTGGTTCCAACGTTGTCCTAAAAACCGCATGCTGTTCTGTGGGAGTTATTATACCTGTTTACTCTACTTTTAAGGCGATTGAGTCACGCAATAGAATTGAGCAACAAAAGTGCCTTGTATACTGGGCAGCATATGGGACTTTTAGCATTGCAGAGACGTTTGCTGACAAAGTTATATCATGGTTTCCCCTTTACCATCACATGAAGTTTGCTTTTCTAGTTTGGCTTCAACTTCCTACTACTGATGGTTCCAAGTGCAAATTCATAGGATGGTTCGATCCACCAATGTGTCAACGTGCGATTGAGATCATACCAGGGTTGTTGAAGTCAAAGAATAAATTGGAAGCACAAATAAAAGAAAAAGATGGTGAATTGAAGAAATTGAAGATGTTGTTGGTTGTTGCTACAATTGTAATCGTCTATCTTGTGTCTTTGTTACTAGTTTGA 558 39.43 MGNDSGYERTCYVKHVECNYSCDISLVQVGLRLLLCPLGSNVVLKTACCSVGVIIPVYSTFKAIESRNRIEQQKCLVYWAAYGTFSIAETFADKVISWFPLYHHMKFAFLVWLQLPTTDGSKCKFIGWFDPPMCQRAIEIIPGLLKSKNKLEAQIKEKDGELKKLKMLLVVATIVIVYLVSLLLV 185
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g02997 185 PANTHER HVA22-LIKE PROTEINS 52 154 IPR004345 -
Enbr6g02997 185 Pfam TB2-DP1, HVA22 family 56 123 IPR004345 -
Enbr6g02997 185 Coils Coil 148 168 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g02997 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr4:23056551 Enbr6g02997 Enbr-Chr6:110055135 dispersed
Enbr Enbr-Chr6:110055135 Enbr8g03247 Enbr-Chr8:105538594 dispersed
Enbr Enbr-Chr6:110055135 Enbr1g02331 Enbr-Chr1:66731908 transposed