AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g03159 ATGGCATTTTCATGTACTATTGTTAGACCAAATAATCCACCTGTTGTTGATTCCATGATCTCAACAACCTCTTTATTTGCTACTACTACTAGTACTAGACAATCATCATCTTCATTAAAGATTCATTCCAATACCACCTTATTTGGCGGTTCTCCGGTTTCTTTGGAATCTTGTTCTTCTTTAAGGGTAGTTAATGCTAGACGGATTAATCCGATCAAAGCAACTGCTACTCAGACACCACCAATTGTTTCAAAGTCCGGTGGCAGTGTGAAGACCAAGGTTGGAATCAATGGTTTTGGAAGAATTGGAAGGTTGGTGTTGAGAATAGCATCATTTAGAGATGATATCGAGGTTGTTGCTGTCAATGATCCTTTTATTAATTCCGATTACATGGCTTACATGTTGAAGTATGATTCTACTCATGGTGTATTTAAAGGAACCATCAATGTTGTTGATGAGTCCACTTTGGAAATCAATGGAAAGCATATAAAAGTGACTAGCCAAAGAGACCCTGCAACAATTCCTTGGGGTGATTTTGGAGCTGACTATGTTGTTGAATCTTCTGGAGTTTTTACAACACTTGATACAGCTTCAGCACATAAGAAGGGTGGCGCCAAAAAGGTGGTGATTTCCGCTCCGTCAGCTGATGCACCGATGTTTGTTGTAGGAGTAAATGAGACCACATACAAGCCACACATGGATATTGTATCCAATGCAAGCTGCACCACTAACTGCTTGGCTCCTTTAGCCAAGGTGGTTCATGAGGAGTTTGGTATTGTTGAAGGTTTAATGACAACTGTGCATGCAACAACCGCTACACAGAAAACTGTTGATGGACCTTCGATGAAGGATTGGCGTGGAGGTCGTGGTGCGGCCCAAAACATCATCCCCAGTTCAACTGGCGCTGCCAAGGCTGTAGGGAAGGTGTTACCAGAACTAAACGGAAAACTCACCGGCATGGCCTTTAGGGTCCCAACAGCAAATGTTTCTGTTGTGGATCTAACTTGTCGACTTGAGAAAAGTGCTTCATATGAAGATGTTAAAGCTTCTATAAAATATGCTTCTGAGGGTCTAATGATAAGAATTCTTGGGTACACCGATGAGGATGTTGTCTCCAATGATTTTGTTGCTGATTCCATGTCAAGTATTTTTGATGCAAAAGCCGGAATTGGGCTAAGTGCATCATTTGTGAAGCTGGTATCGTGGTACGACAACGAGTGGGGTTACAGCAACCGGGTGTTGGACCTCATAGAGCATATGGCGTTGGTGGCAGCTGCCAACTAA 1284 42.45 MAFSCTIVRPNNPPVVDSMISTTSLFATTTSTRQSSSSLKIHSNTTLFGGSPVSLESCSSLRVVNARRINPIKATATQTPPIVSKSGGSVKTKVGINGFGRIGRLVLRIASFRDDIEVVAVNDPFINSDYMAYMLKYDSTHGVFKGTINVVDESTLEINGKHIKVTSQRDPATIPWGDFGADYVVESSGVFTTLDTASAHKKGGAKKVVISAPSADAPMFVVGVNETTYKPHMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVVDLTCRLEKSASYEDVKASIKYASEGLMIRILGYTDEDVVSNDFVADSMSSIFDAKAGIGLSASFVKLVSWYDNEWGYSNRVLDLIEHMALVAAAN 427
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g03159 427 FunFam Glyceraldehyde-3-phosphate dehydrogenase 92 251 - -
Enbr6g03159 427 NCBIfam glyceraldehyde-3-phosphate dehydrogenase, type I 93 415 IPR006424 GO:0006006(InterPro)|GO:0016620(InterPro)|GO:0050661(InterPro)|GO:0051287(InterPro)
Enbr6g03159 427 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 91 257 IPR036291 -
Enbr6g03159 427 Gene3D Dihydrodipicolinate Reductase; domain 2 241 407 - -
Enbr6g03159 427 SMART gp-dh-n-7 92 241 IPR020828 GO:0051287(InterPro)
Enbr6g03159 427 FunFam Glyceraldehyde-3-phosphate dehydrogenase 240 405 - -
Enbr6g03159 427 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 235 253 IPR020831 GO:0016620(InterPro)
Enbr6g03159 427 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 262 278 IPR020831 GO:0016620(InterPro)
Enbr6g03159 427 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 319 336 IPR020831 GO:0016620(InterPro)
Enbr6g03159 427 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 200 213 IPR020831 GO:0016620(InterPro)
Enbr6g03159 427 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 359 374 IPR020831 GO:0016620(InterPro)
Enbr6g03159 427 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 246 403 IPR020829 GO:0016620(InterPro)
Enbr6g03159 427 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 93 193 IPR020828 GO:0051287(InterPro)
Enbr6g03159 427 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 239 246 IPR020830 GO:0016620(InterPro)
Enbr6g03159 427 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 88 421 IPR020831 GO:0016620(InterPro)
Enbr6g03159 427 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 240 403 - -
Enbr6g03159 427 Gene3D - 93 420 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g03159 K00134 glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:115803583 Enbr6g03161 Enbr-Chr6:115817801 proximal