AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g03165 ATGGAGGAGCATTGCGGTAATGGTGCTACTGAGAGAAACTCTCCTTCCGCGGTTAATGAACACGCTTCTCCTTCGTGGAAGCTTGACATCAACCATTTCCGGCCATCACAATGTTCCTCTAGCAATAGTGAATCTTCTACTCTTCGCCGCTTGCTCCCAACTCCAAAAAAACAGGGAAAGGTTCAAGCATACTACAAAAAACAAGAAAGGCTCTTTGAAGGGTTCACTGAGATGGAAACTATGAGCAAATCAGGTTTTCTACCTGGAGCTTTAACTGAGGATGAGATGGAGAACCTTGCTCGGAATGAGAGAATGGCTATATATGTGTCGAATGTAGCTAATTTGGTGCTTTTCATTGCTAAACTCTACGCCTCTTTCGAGAGCAGATCGTTGGCAGTTATTGCATCAACTTTGGATTCGTTTTTGGACTTGTTATCTGGATTCATTTTATGGTTTACTTCAGCTGCTATGAGAAATCCTAACCAATATCACTATCCGATTGGGAAGAATCGTATGCAACCTGTTGGTATCATCGTTTTCGCATCAGTAATGGCAACTCTTGGTTTCCAAATATTGTTAGAGTCTGCTAGGGAACTCATTGCACATACTCACCCTAGCAAGGATCACGACGATGAATTGTGGGTGATCGGTATCATGGTGTTTGTTACGGTCGTGAAGTTTATACTCATGGTTTATTGCCGAAGATTTGAAAATGAAATAGTGAGAGCCTACGCCCAAGATCATTTCTTCGATGTCATCACAAATTCCATTGGGTTAGCAGCTACTGTGTTGGCCATACGATACAAATGGTGGATCGATCCTATTGGAGCAATAATTATTGCGTTCTATACCATCAATACATGGACAAAGACCGTAATAGAGAATGTATGGATGCTAATAGGAAGAACGGCTCCTCCCGAGTTTTTGGCAAAATTGACATATTTGGTATGGAACCATCACAAAGAAATACAACACATTGATACAGTACGATCATACACATTTGGGAGTCATTACTTCGTGGAGGTAGATATAGTGTTGCCCGCGGATATGGTACTAAGTGAGGCACACGATATTGGCGAAATGTTACAAGAAAAGCTAGAGCGATTGCCAGAAGTAGAACGAGCTTTTGTTCATATTGACTTTGAGTATACTCATGTACCTGAACATAAAAGAAAGGCTTGA 1182 41.37 MEEHCGNGATERNSPSAVNEHASPSWKLDINHFRPSQCSSSNSESSTLRRLLPTPKKQGKVQAYYKKQERLFEGFTEMETMSKSGFLPGALTEDEMENLARNERMAIYVSNVANLVLFIAKLYASFESRSLAVIASTLDSFLDLLSGFILWFTSAAMRNPNQYHYPIGKNRMQPVGIIVFASVMATLGFQILLESARELIAHTHPSKDHDDELWVIGIMVFVTVVKFILMVYCRRFENEIVRAYAQDHFFDVITNSIGLAATVLAIRYKWWIDPIGAIIIAFYTINTWTKTVIENVWMLIGRTAPPEFLAKLTYLVWNHHKEIQHIDTVRSYTFGSHYFVEVDIVLPADMVLSEAHDIGEMLQEKLERLPEVERAFVHIDFEYTHVPEHKRKA 393
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g03165 393 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 23 390 IPR050291 GO:0008324(PANTHER)|GO:0016020(PANTHER)
Enbr6g03165 393 SUPERFAMILY Cation efflux protein transmembrane domain-like 102 301 IPR027469 -
Enbr6g03165 393 MobiDBLite consensus disorder prediction 1 22 - -
Enbr6g03165 393 NCBIfam cation diffusion facilitator family transporter 106 380 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Enbr6g03165 393 Gene3D Cation efflux protein transmembrane domain 104 299 IPR027469 -
Enbr6g03165 393 FunFam Metal tolerance protein 11 106 299 - -
Enbr6g03165 393 Gene3D Cation efflux protein, cytoplasmic domain 303 381 IPR036837 -
Enbr6g03165 393 Pfam Cation efflux family 108 299 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Enbr6g03165 393 Pfam Dimerisation domain of Zinc Transporter 305 380 IPR027470 -
Enbr6g03165 393 FunFam Metal tolerance protein 11 302 382 - -
Enbr6g03165 393 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 304 380 IPR036837 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g03165 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
87166 Enbr6g03165 Enbr8g02646
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr2:84880730 Enbr6g03165 Enbr-Chr6:115854570 dispersed
Enbr Enbr-Chr2:84907711 Enbr6g03165 Enbr-Chr6:115854570 dispersed
Enbr Enbr-Chr6:115854570 Enbr8g03400 Enbr-Chr8:109258479 dispersed
Enbr Enbr-Chr6:115848163 Enbr6g03165 Enbr-Chr6:115854570 tandem