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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g03387 ATGGTTAAGTGTTCATCCTTCAAGCTTGATCACCCTTTGGAAAAGAGGCAGGCTGAATCCTCTCGCATCAGAGAAAAGTACCCTGATAGAGTACCAGTGATTGTTGAGAGAGCTGAAAAAACCGATATACCTGACATAGACAAAAAGAAATATCTGGTACCAGCGGACTTGACCATTGGGCAGTTTGTTTATGTGGTTCGTAAGAGGATCAAGCTTAGCCCTGAAAAAGCAATATTTGTTTTCGTCAAGAACATGCTACCACCAACTGCTGCTTTGATGTCTGCAATCTATGAGGAGCATAAGGATGAAGATGGGTTCCTCTACACGAGCTACAGTGGTGAAAACACATTTGGATCTCTAGAAATGCAGTAA 372 42.2 MVKCSSFKLDHPLEKRQAESSRIREKYPDRVPVIVERAEKTDIPDIDKKKYLVPADLTIGQFVYVVRKRIKLSPEKAIFVFVKNMLPPTAALMSAIYEEHKDEDGFLYTSYSGENTFGSLEMQ 123
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g03387 123 MobiDBLite consensus disorder prediction 1 21 - -
Enbr6g03387 123 SUPERFAMILY Ubiquitin-like 5 118 IPR029071 -
Enbr6g03387 123 Pfam Autophagy protein Atg8 ubiquitin like 15 118 IPR004241 -
Enbr6g03387 123 CDD Ubl-ATG8 13 115 - -
Enbr6g03387 123 Gene3D - 1 118 - -
Enbr6g03387 123 FunFam Autophagy-related protein 1 118 - -
Enbr6g03387 123 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED 5 118 IPR004241 GO:0006995(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g03387 K08341 GABA(A) receptor-associated protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2154767 Enbr Enbr2g00827 Enbr-Chr2:25627039 Enbr6g03387 Enbr-Chr6:123341890
2154770 Enbr Enbr2g00831 Enbr-Chr2:25692011 Enbr6g03387 Enbr-Chr6:123341890
2169733 Enbr Enbr6g03222 Enbr-Chr6:117284796 Enbr6g03387 Enbr-Chr6:123341890