AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00842 ATGGGAGAGAGGAAGGTTTTGAATAAATATTACCCGCCGGATTTTGATCCTTCGAAACTCCCTCGGAGGAGACAGCCCAAAAACCAGCAAATAAAAGTACGGATGATGCTTCCTATGAGTATTCGCTGCAACACTTGTGGGAACTACATCTACAAAGGTACCAAGTTCAATTCGCGGAAAGAAGATGTGATTGGGGAGACATATTTGGGAATTCAAATATTCAGGTTCTACTTCAAGTGCACCAAGTGCTCAGCTGAACTGACGATGAAGACTGACCCACAAAATACAGATTATGTGGTTGAGTCTGGTGCAACCCGCAATTTTGAGCCTTGGCGCGCGGAGGATGAGGAAGCAGATGAAGAAAAGAGGAAAAGGGATACAGAAGAGATGGGAGATGCTATGAAATCTTTGGAGAACAGAACACTGGATTCAAAAAGAGAGATGGACATACTTGCTGCGCTGGATGAAATGAAGTCTATGAAGTCGAGACATGCAACTGTGAGTGTAGATGCGATGCTTGAGGCCTTGCAACACACAGCCGAGGAGAAGGAGAAGAAATTAGCAGAGGAGGATGAAGCACTCATAAAATCAATTTTCAATGGTTCAAGAGATTTTGTTCGAAGGATAAATGATGATGAGGATGTTGAAGAAGATGAAGATTTATATCAGCTTTCAACTGACAGTGGTGAAACATCAAACTATAATATCAAAAGGAAAAAAAATTCTGAAGAACTTCTGGGGAACCCAACAGATTCTTTGACAAAAGACAGTATTTTTGACAACTCCAAAAATACAGCAACTCCGGATGGTGTTGAGGCTCCAAATAAGTCTAAATTCATTTTCAAATCGCCCTCAGTTAGAGTCTCAGTTGTCAAGAAGCCTCGTATGACATCCACTGGGAACAATAAATCAAGTGAATCAAACATGCAGGGGAGAGAGCTCAAAGCCAAAGATACAAGCACAGGACTCCAGTCTCTATTGCAAAACTATGACAGCGATGAAAGTGACTAA 1011 41.64 MGERKVLNKYYPPDFDPSKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNTDYVVESGATRNFEPWRAEDEEADEEKRKRDTEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDAMLEALQHTAEEKEKKLAEEDEALIKSIFNGSRDFVRRINDDEDVEEDEDLYQLSTDSGETSNYNIKRKKNSEELLGNPTDSLTKDSIFDNSKNTATPDGVEAPNKSKFIFKSPSVRVSVVKKPRMTSTGNNKSSESNMQGRELKAKDTSTGLQSLLQNYDSDESD 336
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00842 336 MobiDBLite consensus disorder prediction 246 271 - -
Eupl14g00842 336 Pfam Saf4-Yju2 protein 9 334 IPR007590 GO:0000398(InterPro)
Eupl14g00842 336 Coils Coil 173 193 - -
Eupl14g00842 336 MobiDBLite consensus disorder prediction 291 336 - -
Eupl14g00842 336 MobiDBLite consensus disorder prediction 215 276 - -
Eupl14g00842 336 PANTHER SPLICING FACTOR YJU2 1 296 IPR007590 GO:0000398(InterPro)|GO:0008380(PANTHER)|GO:0071006(PANTHER)
Eupl14g00842 336 MobiDBLite consensus disorder prediction 292 336 - -
Eupl14g00842 336 MobiDBLite consensus disorder prediction 111 133 - -
Eupl14g00842 336 MobiDBLite consensus disorder prediction 1 27 - -
Eupl14g00842 336 Hamap Splicing factor YJU2 [YJU2]. 1 334 IPR043701 GO:0000398(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00842 K13115 coiled-coil domain-containing protein 130