AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00860 ATGGCACTCGCTTCGGTCTCTCCATTATCCATTAAAACCCTAAAACCCTCTTCTTCTCGTTCTCCTCTGCAACCTCTCTCGTCAAGACCGTGCGTCGTTGCCTGCAAGCTCGGATCGAAGAATTGGAGATCACTGGTTTCGACAGCGTTGGCTACTGCAGTTATTAGTTTTAGCTCCGGAGGAATGCCTGCACTCGCCGATCTCAATAAGTTCGAAGCTGAAATCCGCGGCGAGTTTGGGATAGGCTCTGCAGCTCAATTTGGTTCTGCTGATCTCAGGAAGGCGGTCCATGTGAATGAGAACTTCAGACGGGCAAACTTCACGTCTGCTGATATGAGAGAATCTGATTTCAGTGGTTCAACATTTAACGGTGCATATCTTGAGAAGGCAGTTGCATATAAGGCTAACTTTAAAGGTGCGGATTTGAGCGACACATTGATGGATCGCATGGTTCTTAATGAAGCTAATCTAACAGATGCTGTTCTCGTTAGATCAGTTCTCACTCGTAGTGATCTTGGGGGTGCAACCATTGAAGGTGCTGACTTCAGCGATGCTGTTTTGGACCTTTCCCAGAAGCAGGCTCTGTGCAAGTACGCAAGTGGAACGAATTCTATAACAGGGGTGAGCACAAGAACAAGTCTAGGTTGTGGGAACAGTCGTCGTAGCGCCTATGGGACTCCGTCTTCCCCTTTGCTTAGTGCCCCACCACAGAAACTTCTTGATCGGGATGGATTTTGTGATCCAGCCACTGGTCTCTGTGATGCAAAGTAA 771 48.12 MALASVSPLSIKTLKPSSSRSPLQPLSSRPCVVACKLGSKNWRSLVSTALATAVISFSSGGMPALADLNKFEAEIRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFKGADLSDTLMDRMVLNEANLTDAVLVRSVLTRSDLGGATIEGADFSDAVLDLSQKQALCKYASGTNSITGVSTRTSLGCGNSRRSAYGTPSSPLLSAPPQKLLDRDGFCDPATGLCDAK 256
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00860 256 Gene3D - 81 224 - -
Eupl14g00860 256 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 41 255 IPR053285 -
Eupl14g00860 256 Pfam Pentapeptide repeats (8 copies) 85 124 IPR001646 -
Eupl14g00860 256 Pfam Pentapeptide repeats (8 copies) 152 185 IPR001646 -
Eupl14g00860 256 SUPERFAMILY Pentapeptide repeat-like 85 187 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00860 - -