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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00861 ATGAGGGTTATGGTAATTAACTTGATGAACAAATCAGAACTAAACAATTACTTGGAAGAACTCATATTCCCTAGTAACCAAGAGTTCATGATATTGGATTGGTGGAAGATAAATAGTCGTAAGTATCCTATATTGGGAATAATGGCTCTTGATATTCTTACAATTTCAGTATCAACTGTTGCATCGGAATCGGCATTTAGCTCTGGCGGTAGAGTTCTTAATCAATATCGTAGTTCCATGCTTCCAAATACTTTGGAGGCGCTTGTATGTTCACAGGATTGGCTAGTACCTATTCCACAAGTTCCTATATCACCTTCCACCTCTACTAGTGGGTATGAGAACTTTGATGTGGAAATGGATATATAA 366 37.16 MRVMVINLMNKSELNNYLEELIFPSNQEFMILDWWKINSRKYPILGIMALDILTISVSTVASESAFSSGGRVLNQYRSSMLPNTLEALVCSQDWLVPIPQVPISPSTSTSGYENFDVEMDI 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00861 121 PANTHER BED FINGER-RELATED 10 96 IPR045259 -
Eupl14g00861 121 SUPERFAMILY Ribonuclease H-like 10 95 IPR012337 -
Eupl14g00861 121 Pfam hAT family C-terminal dimerisation region 13 95 IPR008906 GO:0046983(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00861 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:11967949 Eupl9g01327 Eupl-Chr9:26637845 dispersed
Eupl Eupl-Chr14:11967949 Eupl6g01270 Eupl-Chr6:21460282 transposed