AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00863 ATGCCAGAGATGGATGGATCCACAAAACCACCCCAAATCAGCGAAATGTTCCAGAAATTCGCTCTCGCATTCAAGACCAAAACCATAGAATTCTTCGCCGAAGAAGAAGAAGAAGCCGATGCAGACGGATCAGAATCTCTCTCCCTTCTCGACTCCGCCGAAGAAATCATCACCGGGCAAAGAGTCGTCGTCATTAAACCAGACTCGACCCACAACAAACCATCCCCATCCCCAGCCCCAGCACCTGCACCATCCCTCAATCATCTCGACCAAACCCTAACCTCCTCTCTCTTCGCCACCATTTCCTCCTTCCAAGCCTCCTATCTTCAATTACAGACCGCCCACTCCCCTTTTGATGCCGATAACATCAAAGTAGCTGATCAAGCTGCCGTCTCTCACCTCCAGAGGCTCTCAGAGATCAAACAGTGCTATAAATATCTCAGTAAGAACCCTAACCCTAACGATGACAACCTTAATTTCCCTTTTGGGTCCCACTTTGAAGCTCAGGTGCAGGAGAATCAGAGTCTTCTACGTACTTTGGAGATGCTCGTCAATCGATTGCAGTCGGAGATTGATCTTAAAGATGCCGAGGTCTCGATGATGAAGCAGAAGTTGAAGGATATTGAGAAATCGAATTCGAGGCTGTCGAAGAGGTTAAAGGCATCAAATTGTCCATTATCGTCTGAGGTTTTGTTGTCTGTTGGAGTTTTCGATTCGGTTTTACGTGATGCTTGTAGGTCATCTCATAGTTTTACTAAGGTTTTGATTGATTTGATGAAGAAAGTTGGGTGGAATTTGGATTCTGCGGCGAATTCAGTTCATCCTGATATTGAGTATGCGAAAAGAGGGCATAATCGGTATGCGTTTCTGTCTTACGTTTGTTTAGGGATGTTTAGAGGTTTTAATTCAGAGGGGTTTGGTTTGGGAGGGGATGAAATTGAATGCAATGGTGTTGACTCTAAGAAGAATTCACTGAGGCAATTCGTCGAGCATGCCACAGGTGATGCGATGGAGCTTCTGAGTAAGAATCTAAATGGTTTTTTTGCCAGATTTTGCGAGCACAAGTACCAGCAGCTTATCCACCCTACCATGGAGTCCTCCCTTTTCAAAAACTTGGACCAGAACGAGCTCGTATTGAGTAGTTGGAGGTCTTCGGCTGCTTTCTATGAGTCGTTTGTGAACATGGCTAGCTCAATATGGACGCTTCATAAGTTGGCCTTTTCGTTTGATCCCACAGTCGAGATTTTTCAGGTGGAACGAGGGGTGGATTTCTCGATGGTTTACATGGAAAATGTCACACGGAGAGGTGTGTCACCTGGTAAAGCCAGGGCAAAGGTGGGTTTCACAGTGATTCCCGGTTTTAGAATTGGGAGGACAGTGATTCAGTGTCAGGTGTATCTAACCAGCGGGAAATGTGTAGAGTAA 1425 45.75 MPEMDGSTKPPQISEMFQKFALAFKTKTIEFFAEEEEEADADGSESLSLLDSAEEIITGQRVVVIKPDSTHNKPSPSPAPAPAPSLNHLDQTLTSSLFATISSFQASYLQLQTAHSPFDADNIKVADQAAVSHLQRLSEIKQCYKYLSKNPNPNDDNLNFPFGSHFEAQVQENQSLLRTLEMLVNRLQSEIDLKDAEVSMMKQKLKDIEKSNSRLSKRLKASNCPLSSEVLLSVGVFDSVLRDACRSSHSFTKVLIDLMKKVGWNLDSAANSVHPDIEYAKRGHNRYAFLSYVCLGMFRGFNSEGFGLGGDEIECNGVDSKKNSLRQFVEHATGDAMELLSKNLNGFFARFCEHKYQQLIHPTMESSLFKNLDQNELVLSSWRSSAAFYESFVNMASSIWTLHKLAFSFDPTVEIFQVERGVDFSMVYMENVTRRGVSPGKARAKVGFTVIPGFRIGRTVIQCQVYLTSGKCVE 474
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00863 474 Coils Coil 170 218 - -
Eupl14g00863 474 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 14 467 IPR040225 GO:0009639(InterPro)|GO:0009959(InterPro)
Eupl14g00863 474 Pfam Plant protein of unknown function (DUF641) 90 218 IPR006943 -
Eupl14g00863 474 MobiDBLite consensus disorder prediction 67 88 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00863 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:11994001 Eupl2g00949 Eupl-Chr2:13125642 dispersed
Eupl Eupl-Chr14:11994001 Eupl6g01217 Eupl-Chr6:20366009 transposed