AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00864 ATGGCTTCGTTTCGATTTTTTCTTTTGTTTTTGATCTACATTTATTCATTTTTGAGCCTCTGTTTCGCCGCAGATCCCTTTGTTTACTACGACTGGGACGTCTCTTACATCACTGTTGCTCCTTTGGGTGTCAAACAACAGGTTCTTGCAATTAATGGGAAGTTCCCAGGTCCTATTGTTAATGTGACTACAAATAACCATGTGGTTGTCAACGTTACAAACAGCTTAGATGAGGATCTACTCATTACTTGGAATGGCATTCAACACCGTCGTAATTCTTGGCAAGATGGTGTTCTTGGCACGAATTGCCCGATTCGTCCAAATTGGAACTGGACTTACCAGTTCCAGGTTAAGGATCAGATCGGAAGTTTCTTTTACTTCCCTTCGATCAATTTTCAGAGAGCGGCGGGTGCGTACGGTGGCATTATTGTAAATAACCGTGCTGTGATTCCCGTCCCTTTCGGTACTCCGGATGGGGATATCACCTTCCTCATTGGTGACTGGTACAACCGAAACCATACGGATCTGAGGAAGTCCCTTAAAGATGGGAAAGATCTTGGGATGCCAGACGGTGTTTTGGTGAATGGGAAGGGCCCTTACCGATACAACACCACACTTGTCCCAGATGGCATCGAACATGCATCTTTTGATGTACACCCAGGCAGAACATACCGCATTCGTGTGCACAACGTTGGAATTTCAACTAGTTTGAACTTCAGGATCCAGAACCATAACCTGCTTCTTGTAGAGACAGAGGGATTATATACAGTACAACAAAATTACACTAACCTAGATATTCATGTTGGACAATCTTATTCTTTCTTGGTAACCATGGATCAGAATGCAAGTACAGATTACTACATTGTAGCAAGTGCTAGGTTTGTAAACGAAACTCTTTGGAAAAGGGTTACAGGTGTTGCCATCTTGCACTATTCCAATTCCAAGGGCAAGGCAGCCGGTCCTCTTCCGGATCCACCAAATGACCTGTATGACAAAACATTTTCAATGAATCAGGCAAGATCCGTCAGGATGAACGTTTCTGCTGGTGCTGCTCGACCTAACCCACAGGGATCTTTTAAATATGGCTCAATCAATGTGACCGATTTCTTTCTGTTGAAGAACAAACCACCGGTGATGATTAATGGCAAGAGGCGGACTACACTCAGTGGGATCTCATACGAGAATCCCGACACTCCACTCAGGCTTGCTGATCATTTTAATGTGAAGGGAGTATACACACTTGATTTCCCCATCAACCCACTTACTGGAGCACCCCGGGTGGGAACATCTGTTATTAATGCTACATACAGGGGATTCATGGAAGTCATACTCCAGAACAATGACACTGTAGTGCATAGCTATCACATGGACGGATATGCATTTTTCGTTGTTGGGATGGACTACGGGGACTGGACAGAGAACAGCAGGGGCACATATAATAAATGGGATGGAGTTTCTCGCAGCACTACGCAGGTGTTCCCGGGGGCATGGACGGCAATATTAGTCTCCCTTGACAATGTTGGCGTGTGGAACCTGAGAACAGAAAATCTGGATGCGTGGTATCTTGGCCAGGAAGTGTATGTAAGGATTGTCAATCCAGAGGCTACCAACAAAACCGAGTTGCCCATCCCGGATAATGCCCTTTTTTGTGGTTCTCTCAAACATATGCAACAGCCACCGCATACACCCTTGAAGCAAACTTCATCATCAAGCTCTGATGGAAAGTTGAAGCAATTCTTCACTTTGCTGATGCTGCTCTTTGCTGTCATTCCCATTTTCTGCTGA 1785 44.87 MASFRFFLLFLIYIYSFLSLCFAADPFVYYDWDVSYITVAPLGVKQQVLAINGKFPGPIVNVTTNNHVVVNVTNSLDEDLLITWNGIQHRRNSWQDGVLGTNCPIRPNWNWTYQFQVKDQIGSFFYFPSINFQRAAGAYGGIIVNNRAVIPVPFGTPDGDITFLIGDWYNRNHTDLRKSLKDGKDLGMPDGVLVNGKGPYRYNTTLVPDGIEHASFDVHPGRTYRIRVHNVGISTSLNFRIQNHNLLLVETEGLYTVQQNYTNLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNETLWKRVTGVAILHYSNSKGKAAGPLPDPPNDLYDKTFSMNQARSVRMNVSAGAARPNPQGSFKYGSINVTDFFLLKNKPPVMINGKRRTTLSGISYENPDTPLRLADHFNVKGVYTLDFPINPLTGAPRVGTSVINATYRGFMEVILQNNDTVVHSYHMDGYAFFVVGMDYGDWTENSRGTYNKWDGVSRSTTQVFPGAWTAILVSLDNVGVWNLRTENLDAWYLGQEVYVRIVNPEATNKTELPIPDNALFCGSLKHMQQPPHTPLKQTSSSSSDGKLKQFFTLLMLLFAVIPIFC 594
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00864 594 FunFam Monocopper oxidase-like protein 363 561 - -
Eupl14g00864 594 FunFam Monocopper oxidase-like protein 158 351 - -
Eupl14g00864 594 Pfam Multicopper oxidase 397 534 IPR011706 GO:0005507(InterPro)|GO:0016491(InterPro)
Eupl14g00864 594 Gene3D - 158 350 IPR008972 -
Eupl14g00864 594 Gene3D - 365 561 IPR008972 -
Eupl14g00864 594 SUPERFAMILY Cupredoxins 155 353 IPR008972 -
Eupl14g00864 594 Pfam Multicopper oxidase 160 314 IPR001117 -
Eupl14g00864 594 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507(InterPro)
Eupl14g00864 594 SUPERFAMILY Cupredoxins 22 174 IPR008972 -
Eupl14g00864 594 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Eupl14g00864 594 PANTHER MULTI-COPPER OXIDASE 28 541 IPR045087 GO:0016491(PANTHER)|GO:0046658(PANTHER)
Eupl14g00864 594 SUPERFAMILY Cupredoxins 378 552 IPR008972 -
Eupl14g00864 594 Gene3D - 22 146 IPR008972 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00864 K19791 iron transport multicopper oxidase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:12009173 Eupl7g00265 Eupl-Chr7:5842516 dispersed
Eupl Eupl-Chr14:12009173 Eupl6g00464 Eupl-Chr6:6848295 transposed