AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00867 | ATGGAGAACCATGCTGCCCCTGTTCTCACTGATACTGCACCCATAAGCACCATAAGCAAGCCGGCATACATCCATTCAGCGTTGACTTATTTAACTAGAAAGAAGCCCATACCGGGTAAACTTGATGATGTACGTTATAGTGGTTGGCTAGATGCCATGCAATCCTCCTCACCTCCTCGCAAGAAGCTAACTAAGGATTTCAACATCGAGACTTTGTCAGATGACATCCATTTTCTTTACCGTTCCTGGATGCTCAAGTATCCATCAGCACTCACATCTTTTGAGCAAATCATGGATTATGCAAAGGGCAAGAGGATTGCATTATTTCTTGATTATGATGGGACACTTTCACCAATTGTAGATGACCCTGATCGTGCTATCATGACTAGCGATATGAAAGATACTGTAAGTGATGTGGCAAAGTATTTCCCAACAGCAATAATTAGTGGAAGAAGCCGTGATAAGGTATACGAGTTTGTAGGACTTCCGGAACTCTATTATGCCGGTAGTCATGGGATGGACATCATGGGTCCAGTCAGACACACTGTGTCTGATGATGACCATCCAAATTGTATTAGATCTACTGACAAGCAGGGTAAGGAGGTAAATCTATTCCAGCCTGCTAGTGAATTTTTACCAACGATTGATAAGGTTTTTAGATCCCTTGTCGAGAATACTAAAGGAATTAAAGGTGCAATAGTGGAGAATAATAAGTTTTGTGTCTCTGTACATTACCGTAATGTAGATGAGAAGAGTTGGGATACAATTGCAGAGTGTGTTCACAATATTCTAAAAGGCTACCCGCGTCTGCGATTAACGCATGGGCGGAAGGTTTTAGAGGTCCGCCCTGTGATTAATTGGGACAAGGGGAAAGCTGTGGAATTTCTACTTGAATCACTTGGACTAAATAATTGTGATGATGTGCTACCCATATATGTTGGAGATGACCGTACAGATGAAGATGCTTTTAAGGTCTTGCGAAAGGGAAATCAAGGTTATGGGATTTTAGTGTCGTCAGTACCAAAAGAAAGCAATGCCTTCTACTCTTTGAGAGATCCATCTGAGGTCATGGAATTTCTCAAGTCCCTGGTGAGATGGAAGAAATCAAGTGGGGGCCATAAATAA | 1125 | 41.96 | MENHAAPVLTDTAPISTISKPAYIHSALTYLTRKKPIPGKLDDVRYSGWLDAMQSSSPPRKKLTKDFNIETLSDDIHFLYRSWMLKYPSALTSFEQIMDYAKGKRIALFLDYDGTLSPIVDDPDRAIMTSDMKDTVSDVAKYFPTAIISGRSRDKVYEFVGLPELYYAGSHGMDIMGPVRHTVSDDDHPNCIRSTDKQGKEVNLFQPASEFLPTIDKVFRSLVENTKGIKGAIVENNKFCVSVHYRNVDEKSWDTIAECVHNILKGYPRLRLTHGRKVLEVRPVINWDKGKAVEFLLESLGLNNCDDVLPIYVGDDRTDEDAFKVLRKGNQGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVRWKKSSGGHK | 374 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00867 | 374 | Gene3D | - | 216 | 373 | IPR023214 | - | |
| Eupl14g00867 | 374 | Gene3D | - | 106 | 197 | IPR023214 | - | |
| Eupl14g00867 | 374 | Pfam | Trehalose-phosphatase | 109 | 354 | IPR003337 | GO:0005992(InterPro) | |
| Eupl14g00867 | 374 | SUPERFAMILY | HAD-like | 107 | 366 | IPR036412 | - | |
| Eupl14g00867 | 374 | NCBIfam | HAD-IIB family hydrolase | 108 | 327 | IPR006379 | - | |
| Eupl14g00867 | 374 | CDD | HAD-TPP | 107 | 358 | - | - | |
| Eupl14g00867 | 374 | FunFam | Trehalose 6-phosphate phosphatase | 248 | 374 | - | - | |
| Eupl14g00867 | 374 | NCBIfam | trehalose-phosphatase | 207 | 365 | IPR003337 | GO:0005992(InterPro) | |
| Eupl14g00867 | 374 | PANTHER | TREHALOSE 6-PHOSPHATE PHOSPHATASE | 32 | 370 | IPR044651 | GO:0004805(PANTHER)|GO:0004805(InterPro)|GO:0005992(PANTHER)|GO:0005992(InterPro) | |
| Eupl14g00867 | 374 | FunFam | Trehalose 6-phosphate phosphatase RA3 | 106 | 247 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00867 | K01087 | trehalose 6-phosphate phosphatase [EC:3.1.3.12] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:2607038 | Eupl14g00867 | Eupl-Chr14:12066261 | dispersed | |
| Eupl | Eupl-Chr14:12066261 | Eupl8g00333 | Eupl-Chr8:5851308 | dispersed | |
| Eupl | Eupl-Chr14:12066261 | Eupl13g01688 | Eupl-Chr13:35437714 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Eupl11g00549 | . | 1 | 865 | Trehalose Biosynthesis gene family | AT1G23870 | 74.913 | 0.0 | 1367.0 | |
| Eupl10g00013 | . | 1 | 856 | Trehalose Biosynthesis gene family | AT1G23870 | 66.705 | 0.0 | 1248.0 | |
| Eupl10g00034 | . | 1 | 856 | Trehalose Biosynthesis gene family | AT1G23870 | 66.705 | 0.0 | 1245.0 | |
| Eupl11g01595 | . | 1 | 850 | Trehalose Biosynthesis gene family | AT4G17770 | 74.971 | 0.0 | 1339.0 | |
| Eupl2g01013 | . | 1 | 941 | Trehalose Biosynthesis gene family | AT1G78580 | 77.044 | 0.0 | 1470.0 | |
| Eupl8g01169 | . | 1 | 855 | Trehalose Biosynthesis gene family | AT4G17770 | 78.996 | 0.0 | 1438.0 | |
| Eupl13g01688 | . | 577 | 840 | Trehalose Biosynthesis gene family | AT1G06410 | 25.614 | 8.35e-08 | 52.4 | |
| Eupl4g00762 | . | 1 | 865 | Trehalose Biosynthesis gene family | AT1G23870 | 75.491 | 0.0 | 1392.0 | |
| Eupl6g01274 | . | 1 | 941 | Trehalose Biosynthesis gene family | AT1G78580 | 78.384 | 0.0 | 1483.0 | |
| Eupl6g01277 | . | 754 | 800 | Trehalose Biosynthesis gene family | AT1G78580 | 53.191 | 3.18e-10 | 55.5 | |
| Eupl8g00333 | . | 545 | 847 | Trehalose Biosynthesis gene family | AT4G17770 | 25.74 | 3.02e-09 | 56.6 | |
| Eupl14g00867 | . | 581 | 834 | Trehalose Biosynthesis gene family | AT1G70290 | 27.24 | 6.46e-12 | 65.1 | |
| Eupl8g00217 | . | 69 | 626 | Trehalose Biosynthesis gene family | AT4G24040 | 59.643 | 0.0 | 687.0 | |
| Eupl9g01479 | . | 18 | 131 | Trehalose Biosynthesis gene family | AT1G78580 | 55.0 | 3.48e-22 | 88.6 | |
| Eupl14g00211 | . | 583 | 835 | Trehalose Biosynthesis gene family | AT1G70290 | 25.09 | 2.18e-06 | 47.8 | |
| Eupl3g00377 | . | 18 | 131 | Trehalose Biosynthesis gene family | AT1G78580 | 55.0 | 3.29e-22 | 89.0 | |
| Eupl6g01218 | . | 1 | 841 | Trehalose Biosynthesis gene family | AT1G06410 | 77.856 | 0.0 | 1379.0 |