AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00869 ATGCCCTGCACATTCCTCTCTCTCCTCTCTCTCTCCTCCTTCTTCTTCTTCTTCTTCTTCCATCTCGCCCAAGCCCATCAAATCCGATCCGATCTCGATTGCACCGGGCGGTGGGTCCACATCAGAAAACTCCCTTCTCGTTTCAATCTCCATCTCCTTACCAACTGCTCTGATTACCCGCTCTATGATGATTTCTGCCCTTACTTAGCCAATCACGGCCTCGGCCAGAAGACCCATAACCGCTCCCATAGTTGGTTCCGTACCGAACCCTTTATGCTTGAACTCATCTTCCACCGTCGCATCCTCGAGTACCCTTGTTTGACCTCTAATCCTTCCCACGCCGACGCCGTATACCTCCCTTATTACACTGCCATCGACGCACTTCGATATCTCTACGGCCCTGACGTCAATTCTAGTGCCCAACACGGTCTCCACCTCTTCCAATTCCTCCAGCAGGATTCCCCCCAGATATGGAATCGAAATTCCGGCCATGATCATTTCTTGGTCATGGCACGTCCCGCTTGGGATTTCTCTCAGCCATTATCGAACGATCCTCCGATCTGGGGAACATCCTTCCTAGAATTGCCTGAATTCTATAACATCACGGCGCTGACGCTCGAGTCCCGGGCCTGGCCGTGGCAAGAGCAGGCGATCCCGCACCCGACACCATTCCACCCTCCCAACGTCGCATTGCTGGAGTCATGGATTAGGCGGGTACGCCGCTCTCACCGCACCACACTCATGCTCTTCGCTGGTGGGGGTGGAGTGTCAGCAGCGCGCAACATTCGTCACAGCATTCGCGTTGAGTGCGAAAACAACACCAGTAGCAACAGCAACAGCAACAGCAACAGCACCAGCACCAGCCTTTCCAAGTTATGCGAAATCGTCGATTGCTCCAATGGCATGTGCGAACACGACCCAATTCGGTACATGAAGCCAATGTTGCAGTCAAGCTTCTGCCTCCAACCACCTGGTGACACACCAACACGACGGTCGACCTTCGATGGGATAATTGCTGGATGTATTCCGGTGTTCTTCGAGGCATTGTCCGCAAAGGCACAATTCGGGTGGCACTTGCCAGAGAAGCAATACGCAGAATTCTCAGTGTTCATACCCAAGGAGGAGGTGGTCTTGAAGGGGTTGAGCATCGTGGATGTACTAATGGCGATTCCTAAGGCCGACGTCCGGAGGATGAGAGATAATGTTATTGAGTTGATGCCAAGAGTTATGTACAGAAGGCATGGTAGCTCTCTGGGGTGGACAGCGAAGAAGGACGCCTTCGATATTGCGGTGGAGGGAGCCATACAAAGGATCAAATCCAGAGTTGCAGGAGTGACAGTATGA 1344 52.83 MPCTFLSLLSLSSFFFFFFFHLAQAHQIRSDLDCTGRWVHIRKLPSRFNLHLLTNCSDYPLYDDFCPYLANHGLGQKTHNRSHSWFRTEPFMLELIFHRRILEYPCLTSNPSHADAVYLPYYTAIDALRYLYGPDVNSSAQHGLHLFQFLQQDSPQIWNRNSGHDHFLVMARPAWDFSQPLSNDPPIWGTSFLELPEFYNITALTLESRAWPWQEQAIPHPTPFHPPNVALLESWIRRVRRSHRTTLMLFAGGGGVSAARNIRHSIRVECENNTSSNSNSNSNSTSTSLSKLCEIVDCSNGMCEHDPIRYMKPMLQSSFCLQPPGDTPTRRSTFDGIIAGCIPVFFEALSAKAQFGWHLPEKQYAEFSVFIPKEEVVLKGLSIVDVLMAIPKADVRRMRDNVIELMPRVMYRRHGSSLGWTAKKDAFDIAVEGAIQRIKSRVAGVTV 447
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00869 447 Pfam Exostosin family 34 377 IPR040911 -
Eupl14g00869 447 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 27 435 IPR004263 GO:0006486(InterPro)|GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00869 K20888 xyloglucan galactosyltransferase MUR3 [EC:2.4.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:12109730 Eupl1g01798 Eupl-Chr1:39818946 dispersed