Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00871 | ATGGTGGGGTTTTCTGCTCTTCCTCATTGGTTGCAATCCCTTCTTAGGGAGAGGTTCTTTAATACGTGCTTCGTTCATGAGACTGCGAAGAAGAATGAAAAGAACATCTTTTGCTTGGATTGCTGCACTAGCATCTGCCCTCATTGCTTATCTCCTCACCGCTCTCACAGACTCTTGCAGATACGGAGGTATGTTTATCACGACGTTATTCGTGTTGACGAAGTGGAGAAGCTAATCGACTGTGCCTTTGTTCAGCCTTACACGACGAACAGCGCAAAGGTGGTGTTCATAAACGAAAGGCCTCAATCTCGACCCTTCAGAGGCTCAGGAAACATCTGCAGTACCTGCGACAGGAGCCTGCAAGACCCATATCTCTTCTGTTCTATTGCCTGCAAGCTTTATCATCTTGTGAGGAGCGGAGCTGAGCTTTCTAAATATCTCTACGAGTGCGAATTTCTTCCATTACCAGAAGGAACGAAAGGAGAGAGCTATTGTGACCTTGATGAGGGACAAATGACGCCTGACTCAGTTCTTGAGTCGCCGATTTCTTTACACACCTCGTCTGGGTCGAGCGCGAGCGGTGGTGGAGTAGGTTGCAGGACTCTTGCCTGCACTGCCACAACTGAGTTTACTAAGAAGAAACGCAGTAGCGTATCGGGATCTCGTACACAGTATCGGCCTCCGACATGCTCTCATGCATCCGAAATTGCTATCAATATGAACCGGCGAAAGAGTATCCCGCACCGGTCACCGCTTTATTGA | 762 | 48.43 | MVGFSALPHWLQSLLRERFFNTCFVHETAKKNEKNIFCLDCCTSICPHCLSPHRSHRLLQIRRYVYHDVIRVDEVEKLIDCAFVQPYTTNSAKVVFINERPQSRPFRGSGNICSTCDRSLQDPYLFCSIACKLYHLVRSGAELSKYLYECEFLPLPEGTKGESYCDLDEGQMTPDSVLESPISLHTSSGSSASGGGVGCRTLACTATTEFTKKKRSSVSGSRTQYRPPTCSHASEIAINMNRRKSIPHRSPLY | 253 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00871 | 253 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 6 | 252 | - | - | |
| Eupl14g00871 | 253 | ProSiteProfiles | Zinc finger B-box type profile. | 23 | 61 | IPR000315 | GO:0008270(InterPro) | |
| Eupl14g00871 | 253 | Pfam | PLATZ transcription factor | 62 | 133 | IPR006734 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00871 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr10:18728511 | Eupl14g00871 | Eupl-Chr14:12148142 | dispersed | |
| Eupl | Eupl-Chr14:12148142 | Eupl3g01826 | Eupl-Chr3:46469853 | dispersed | |
| Eupl | Eupl-Chr14:12148142 | Eupl13g00200 | Eupl-Chr13:2756977 | transposed |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Eupl | PLATZ | 3.1e-29 | No_clan | TF | PLATZ |