AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00873 ATGGCTCCTCCAACGCTCCCGCGGGTCGGCCTGCGGCCTCTAATTCCCTCACAGAAGACGTCGCGCAAGGTTGCTGTGATCGGAGGTGGCGCGGCCGGCCTGGTTGCAGCTCGAGAGCTGCACAGAGAGGGCCACAAGGTCGTAGTCTTCGAACGCAACGACAAAGTCGGAGGGACTTGGGTCTATAATCCCAACGTTGAGTCCGACCCACTAGGTCTCGATCCATCTCGAACGATCGTCCACACCAGTCTCTACGATTCTCTACGCACCAATCTCCCCAGGGAAGTCATGGGTTTTCGCGATTACCCCTTTGTGGTTAAAGATGGGAGACAGAGGGACCCTCGAAGGTTTCCGGGTCACAAGGAGGTCCTACTTTATTTGGACAATTTCGCATGTGATTTCCAACTCACTGAGTTGATTCGGTTTGATACCGAGGTGTTTCATGTTGGGTTGGTGGAGGAAGGAAAATGGGTAGTGAGGTCTCGATGCAGAGGTCGAACTGATGGAGAATATATACCGCTTGATGTTGATGAGGTTTATGATGGTGTGGTAGTTTGTAATGGACACTACACTGAGCCGCGTGTTGCAGAGATTCCAGGTATTGATGCTTGGCCTGGGAAACAAATCCATAGCCACAATTATCGTGTTACTGACCCCTTTCGTGATCAGGTTGTGGTTTTGATAGGGAGCTCTGCTAGTTCTTATGACATCTCTAGGGACATTGCCAAAGTTGCTAAAGAAGTTCATGTTGCTTCAAGATCTGTTACCAATGGAACACCGACGAAGCAGCTTGGCTATGAGAACATGTGGCTTCATTCAATGATAAAGAATGCCCATGAAGATGGTACAATACTATTCCAAGATGGAAGCTCAGTCCTTGTTGATGTCATTCTACACTGCACAGGGTACAAGTACTATTTTCCTTTTCTAGAGACCAGTAATATTGTGACCGTGGATGACAATCGTGTGGGGCCACTATATAAGCACATTTTTCCACCACTATTGGCCCCGTGGCTTTCTTTTATCGGTTTACCTTGGAAGGTTATTCCTTTTCCCTTGGTTGAATTACAAAGCAAGTGGGTGGCAGGTGTTTTATCTGGACGGATTTCACTTCCATCACAACAAGAGATGATGGCAGATGTCGAAGCCTTTTACTTAAGTCTTGAAGCTGCTGGCTTGCCCAAACGTTACACTCATAACATATCAGATTATCAGTTTGAGTACAATGACTGTCTTGCTGCTGAGTGCGGGGATCCAGCTTCAGAGGAGTGGAGAAAACAGATGTATTTGGCAACTGCGAAGAACAGGGTTGCTAAACCAGAAACTTATCGCGATGAATGGGAAGACCAACACTTGGTCTTGCAAGCCCAAGAAGACTTCCTCCATTACTTCCCCAATGGAGGTAGGTAA 1410 47.59 MAPPTLPRVGLRPLIPSQKTSRKVAVIGGGAAGLVAARELHREGHKVVVFERNDKVGGTWVYNPNVESDPLGLDPSRTIVHTSLYDSLRTNLPREVMGFRDYPFVVKDGRQRDPRRFPGHKEVLLYLDNFACDFQLTELIRFDTEVFHVGLVEEGKWVVRSRCRGRTDGEYIPLDVDEVYDGVVVCNGHYTEPRVAEIPGIDAWPGKQIHSHNYRVTDPFRDQVVVLIGSSASSYDISRDIAKVAKEVHVASRSVTNGTPTKQLGYENMWLHSMIKNAHEDGTILFQDGSSVLVDVILHCTGYKYYFPFLETSNIVTVDDNRVGPLYKHIFPPLLAPWLSFIGLPWKVIPFPLVELQSKWVAGVLSGRISLPSQQEMMADVEAFYLSLEAAGLPKRYTHNISDYQFEYNDCLAAECGDPASEEWRKQMYLATAKNRVAKPETYRDEWEDQHLVLQAQEDFLHYFPNGGR 469
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00873 469 PIRSF FMO 20 260 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00873 469 PIRSF FMO 265 421 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00873 469 PRINTS Flavin-containing monooxygenase (FMO) signature 22 38 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00873 469 PRINTS Flavin-containing monooxygenase (FMO) signature 209 223 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00873 469 PRINTS Flavin-containing monooxygenase (FMO) signature 287 314 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00873 469 PRINTS Flavin-containing monooxygenase (FMO) signature 236 251 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00873 469 PRINTS Flavin-containing monooxygenase (FMO) signature 352 365 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00873 469 Gene3D - 23 446 IPR036188 -
Eupl14g00873 469 Gene3D - 197 300 IPR036188 -
Eupl14g00873 469 FunFam Flavin-containing monooxygenase 197 300 - -
Eupl14g00873 469 PANTHER DIMETHYLANILINE MONOOXYGENASE 21 449 IPR050346 -
Eupl14g00873 469 SUPERFAMILY FAD-NAD(P)-binding domain 277 451 IPR036188 -
Eupl14g00873 469 SUPERFAMILY FAD-NAD(P)-binding domain 20 254 IPR036188 -
Eupl14g00873 469 Pfam Flavin-binding monooxygenase-like 271 384 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00873 469 Pfam Flavin-binding monooxygenase-like 22 254 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00873 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:12186259 Eupl14g00885 Eupl-Chr14:12484141 dispersed
Eupl Eupl-Chr14:12186259 Eupl11g00863 Eupl-Chr11:11069906 transposed