AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00885 ATGGCTCGGTCTGTTAACGTGGCAGTGATCGGAGCGGGCGTAGCTGGTCTCGTCGCTGCTCGAGAGCTTCGAAGCGAAGGCCACCGAGTCGTTGTATTCGAAAAGGGAGACCAACTCGGAGGCACATGGGTTTACGATCCCCGAGTCGAGATCGACCCGTTGGGTCTCGACCCGGACCGAGAGATCGTTCACAGCAGCCTCTACCTTTCGCTCCGTACAAACCTTCCTCGACAGATCATGGGTTTCTTGGATTACCCATTTCTGATTAGAGAAAATGGAGACTCGAGGGCGTTTCCTGGACACGAAGAGGTGCTCTCGTTTCTGAATGATTTCGCGAGAGATTTCGGAATCGTTGAGTCGATTCGATTTGGTACTGAAGTTGTTCGAGTGGAGCGAGTTAATGGAAGGAAAGACGAGTGGGTGGTTGCGTGGAGGACTCGGGAAACGGAATCGGAAGAGGAGGTGTTTGAGGCTGTGGTCGTCTGTAATGGTCACAACACGGAACCGCGAATCGCTGAGATTCCAGGCATTGATAGGTGGGCTGGAGAGGAGATTCACAGTCACAACTACCGCACCCCAGAACCGTTTCGGGACCGGATTGTAGTTTTAATTGGAAGTGGACCTAGTGCCTATGATATCTCTAGAGATATTTCAAAGGTTGCCAAAGAAGTCCATCTAGCATCAAGATCCCCAAATGTTATAGTCGCAAAATTAGATAACCATGACAATATATGGCAGCATTCAAAGATAGATTGTATCGATGACGAAAAGAAGGTGGTCTTTCAAGATTGCTCCTCAGTTCATGCAGATATCATTTTCCATTGTACTGGGTACAAATATCATTTCCCATTTCTAGAAACCAATGGAATCATGAGCGTTGAGGACAATCGTGTTGGACCTCTATATAAGCATGTCTTCCCCCCACGCTTAGCTCCTTGGCTCTCTTTTGTGGGAATACCTAACAAGGTTATTCCCTTTCTAGTAGCTGAGTTACAGTCCAAGTGGGTAGCACAAGTTTTATCTGGCAAGGTGTTGTTGCCAGTGGAAGAGGACATGATGGCCTCAGTTGAAGAACTTTACCATCATATGGAGGATATCGGGTGGCCCAAGCACTACACCCATACACTGCACCCAAATGAGTTTGAGTATACGAATTGGCTGGTCGCTCAGGTGGGATTGCCGCCCTTAGGTGAGTGGATAGAGCAGATGTATCGTGGGACTATCAAGTGTCTTTTGTCTCATCGTGATGGATATCGAGACAAATGGGATGCACACTCGATCAACGATCAGTCCTCCAGCTAA 1302 48.16 MARSVNVAVIGAGVAGLVAARELRSEGHRVVVFEKGDQLGGTWVYDPRVEIDPLGLDPDREIVHSSLYLSLRTNLPRQIMGFLDYPFLIRENGDSRAFPGHEEVLSFLNDFARDFGIVESIRFGTEVVRVERVNGRKDEWVVAWRTRETESEEEVFEAVVVCNGHNTEPRIAEIPGIDRWAGEEIHSHNYRTPEPFRDRIVVLIGSGPSAYDISRDISKVAKEVHLASRSPNVIVAKLDNHDNIWQHSKIDCIDDEKKVVFQDCSSVHADIIFHCTGYKYHFPFLETNGIMSVEDNRVGPLYKHVFPPRLAPWLSFVGIPNKVIPFLVAELQSKWVAQVLSGKVLLPVEEDMMASVEELYHHMEDIGWPKHYTHTLHPNEFEYTNWLVAQVGLPPLGEWIEQMYRGTIKCLLSHRDGYRDKWDAHSINDQSSS 433
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00885 433 PANTHER DIMETHYLANILINE MONOOXYGENASE 6 424 IPR050346 -
Eupl14g00885 433 Pfam Flavin-binding monooxygenase-like 256 393 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 Pfam Flavin-binding monooxygenase-like 6 242 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 PIRSF FMO 3 253 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 PIRSF FMO 247 396 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 SUPERFAMILY FAD-NAD(P)-binding domain 249 423 IPR036188 -
Eupl14g00885 433 Gene3D - 173 275 IPR036188 -
Eupl14g00885 433 FunFam Flavin-containing monooxygenase 173 275 - -
Eupl14g00885 433 PRINTS Flavin-containing monooxygenase (FMO) signature 212 227 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 PRINTS Flavin-containing monooxygenase (FMO) signature 5 21 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 PRINTS Flavin-containing monooxygenase (FMO) signature 29 53 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 PRINTS Flavin-containing monooxygenase (FMO) signature 327 340 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 PRINTS Flavin-containing monooxygenase (FMO) signature 262 289 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 PRINTS Flavin-containing monooxygenase (FMO) signature 185 199 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl14g00885 433 SUPERFAMILY FAD-NAD(P)-binding domain 1 233 IPR036188 -
Eupl14g00885 433 Gene3D - 7 396 IPR036188 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00885 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:12186259 Eupl14g00885 Eupl-Chr14:12484141 dispersed
Eupl Eupl-Chr14:12484141 Eupl4g01197 Eupl-Chr4:18261429 dispersed
Eupl Eupl-Chr14:12484141 Eupl11g00863 Eupl-Chr11:11069906 transposed