Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00899 | ATGGCAAAGAGTTACTTCAAGCAAGAGCATGACCTTGAGAAGAGGCGGGCTGAAGCTGCTAGAATTAGGGAGAAATACCCGGACAGGATCCCGGTCATTGTCGAGAAAGCGGAGAGAAGCGATATCCCAAACATTGATAAGAAAAAGTACCTCGTACCAGCTGACTTGACTGTTGGGCAATTCGTCTACGTAATCCGCAAGAGAATCAAATTGAGCGCAGAGAAGGCAATCTTCATATTCGTAGACAACGTCCTCCCACCTACAGGGGCAATAATGTCTACAATATACGACGATAAGAAGGATGAAGACGGGTTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGATCCAGATTGTGCTGTAG | 369 | 45.53 | MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDDKKDEDGFLYVTYSGENTFGIQIVL | 122 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00899 | 122 | FunFam | Autophagy-related protein | 1 | 117 | - | - | |
| Eupl14g00899 | 122 | Pfam | Autophagy protein Atg8 ubiquitin like | 14 | 117 | IPR004241 | - | |
| Eupl14g00899 | 122 | Gene3D | - | 1 | 118 | - | - | |
| Eupl14g00899 | 122 | SUPERFAMILY | Ubiquitin-like | 3 | 117 | IPR029071 | - | |
| Eupl14g00899 | 122 | PANTHER | MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED | 4 | 117 | IPR004241 | GO:0006995(PANTHER) | |
| Eupl14g00899 | 122 | CDD | Ubl-ATG8 | 12 | 114 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00899 | K08341 | GABA(A) receptor-associated protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr12:29941074 | Eupl14g00899 | Eupl-Chr14:12682603 | dispersed | |
| Eupl | Eupl-Chr14:12682603 | Eupl6g00480 | Eupl-Chr6:7066616 | dispersed | |
| Eupl | Eupl-Chr14:12682603 | Eupl2g00342 | Eupl-Chr2:3879973 | transposed |