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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00903 ATGCCGTCGCCGCCGCCACCACAGGTGAGAGAGAGGGAGAGGGAGGGACGAATGGGGTGCTTGGGTTTTTTTTGCAGATATCTCTTCTCCCGTTCGATCTCTGCTCCCGAGAGAATCATAGAGGAGGAGAGACAAATGGGGATAATCAGGAGCAATTTTATATTCTTAATGGGGACCGTGTGTGGAGTTTACATTGCTCAGAACTACAACGTTCCCAATATAAAGAAGGTCGCGAACACGGGGCTCTTGATGGCTAAGCACATTGAAGAAACTTACCGAAAGCCCAAGAAGAGAGACGTTGGAGTCTGTAGCGGAAATAAACTTGAACTTCGTGTTGTTTATTGTGTTCCCATTCAACACACTCTACAGTACTGGATTTTGAAGGAGATGCCAAAGCCATAG 402 47.01 MPSPPPPQVREREREGRMGCLGFFCRYLFSRSISAPERIIEEERQMGIIRSNFIFLMGTVCGVYIAQNYNVPNIKKVANTGLLMAKHIEETYRKPKKRDVGVCSGNKLELRVVYCVPIQHTLQYWILKEMPKP 133
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00903 133 PANTHER OS07G0239500 PROTEIN 46 99 - -
Eupl14g00903 133 Pfam Domain of unknown function (DUF4535) 52 95 IPR027854 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00903 K27319 short transmembrane mitochondrial protein 1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:12857089 Eupl14g00909 Eupl-Chr14:12926421 dispersed
Eupl Eupl-Chr14:12857089 Eupl14g00908 Eupl-Chr14:12913526 proximal