AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00904 ATGCCCAACTACGACCAGGGCTCAGTTCTACAATCACAAGAGGCTGCCCAAAATGATGGAATCCCTGATGTGGTGCATGAGACACAACAATCATCCACTGAAGATGTTGAAGATATGACTCACTATACTCGTCGACCTACCCCCCAAGGTGTGAAACGTAAAAAAATTTCTGGTACTGCAAAGATTAGTAACATCTTTGAGAGATTGGTTGATTGTGTCGAATCGATGTCAAAGAGTGCAAGTACCCCAACTCCTGAATTGTATAGCATAAAAGATTGTGTAGACCTTCTCAACGAAATGCCGGATGTGCTAAGTGACAGTGATCTTTATATGGATGCTGTGGACATCTTTATGGAAAAATCAAGAAGGGAGGCATTCATTTGTATACCTCCGGATGTTCGACTTACGTGGTTACAGAGACAAAGGCGACCCTAG 435 42.99 MPNYDQGSVLQSQEAAQNDGIPDVVHETQQSSTEDVEDMTHYTRRPTPQGVKRKKISGTAKISNIFERLVDCVESMSKSASTPTPELYSIKDCVDLLNEMPDVLSDSDLYMDAVDIFMEKSRREAFICIPPDVRLTWLQRQRRP 144
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00904 144 MobiDBLite consensus disorder prediction 1 54 - -
Eupl14g00904 144 PANTHER - 6 141 IPR045026 -
Eupl14g00904 144 MobiDBLite consensus disorder prediction 1 29 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00904 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:12867212 Eupl5g00399 Eupl-Chr5:16019229 dispersed
Eupl Eupl-Chr14:12867212 Eupl14g00910 Eupl-Chr14:12936536 proximal