Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00908 | ATGAGTATAGGGGAGTCTGATAACATTGAGGAGCTGGCCAGGATTCTGGGTTGCTCCATAGGTTCTTTGCCCTCCTCCTTTCTCAGACCCCCTTTGGGAGCGCCATATAGGGCAAAATCGGTTTGGGACCCAGTAGTGGAAAGGGTTAGGCGTCAGTTGGCTAGCTGGAAGGGGAGATACCTATCCAAATGGGGCAAGTTGGTTCTTATCGAGAGCACATTGTTTAGTCTACCTGTGTATTTCCTCTCTCTGTTCTCTATACCGTTAGAGGTGGAGAAAAGGTTAGAGAGGTTTATGAGAAACTTTTTGTGGAATAACTCGGGGGATTCGTTCAGATATCACCTTGTGAAGTGGGCCCAAGCGTGTTTGTCCAAGAAAGGGGGTGGCCTAGGTTTCAGAAAGATTGGTGTTATGAATAAGGCGCTATTGGGCAAATGGATATGGAGATTTGGAAAGGAGAGAAATAGTTTGTGGCGTAGAGTAGTTGCTAGCATTTACGGGGAGGAGGAGGGGGGTTGGGTGTCTAAGCCCCATAGTGGGTCAACTTGGTGTGGGGTTTGGAGAGGGATTCTCAAGTGCAAAGGGCAAACAGTTGATCATTTTTTGATCGGTTCTTCCCTGGAAACAAGATGGGATTTGAAACTCAGAAGGAATCCTTTTGAGTGGGAAAAAGAGCAGATTAATTTTTTGCATGATTGTTTGAAATATTATCTTGTTTCCAATTCTGAGGACCATATGTTCTGGACCTACTCCAAGACGGGAGATTTCTCGGTCCAGTCACTGTATGAGATATTATCATCTACATCAGTATCGTCATCTACCTGTTATCCTTGCTTAGAAATTTGGAAATCCAAAGCCCCACAAAAAGTCCGCTTCTTTGCTAGGCTTGCCACCCTGAATAAGATCCTTACTGTACAAAATTTGATCATTAGGAAATGGATCTTGGTAGACTATTGTGTTATGTGCAAGGCAAGTGGGGAGAGCACTAATCATCTTCTAGTTCATTGTGAGTTCGCTAGACAGGTTTGGACATTCTTCCTAGAGCAGGTGGGTGTTGCTTGGGTCTTTCCGGAAAGCATAGGGGCAGTTATGGAGAGATGTCCTAAAGTTCTTATGTCGGCCAGGGGAAAGTTGTTGTGGAAGATGATTCCGCTAGCAATTATCTGGGGAGTGTGGCTGGAGCGGAATAAGAAAAGGCAAGGGGAGCTCGCTTTTTCACGTCATCCTGAGTATCAAGGCTCTCTTATACCGCTGGGAGAGAAGAGGAGTTTCAAACGAATGGGGATAATCAAGAGCAGTTTCTCATTCTTGATGGGGACCGTGTGTGGAGTTTACATTGCTCGGAACTACAACGTTCCCAACATAGAGAAGCTCGCGAAAATGGGGCTCTTGATAGCCAAACACATTGAAGAGACTTATCGAAAGCCCAAGAAGTGA | 1437 | 45.37 | MSIGESDNIEELARILGCSIGSLPSSFLRPPLGAPYRAKSVWDPVVERVRRQLASWKGRYLSKWGKLVLIESTLFSLPVYFLSLFSIPLEVEKRLERFMRNFLWNNSGDSFRYHLVKWAQACLSKKGGGLGFRKIGVMNKALLGKWIWRFGKERNSLWRRVVASIYGEEEGGWVSKPHSGSTWCGVWRGILKCKGQTVDHFLIGSSLETRWDLKLRRNPFEWEKEQINFLHDCLKYYLVSNSEDHMFWTYSKTGDFSVQSLYEILSSTSVSSSTCYPCLEIWKSKAPQKVRFFARLATLNKILTVQNLIIRKWILVDYCVMCKASGESTNHLLVHCEFARQVWTFFLEQVGVAWVFPESIGAVMERCPKVLMSARGKLLWKMIPLAIIWGVWLERNKKRQGELAFSRHPEYQGSLIPLGEKRSFKRMGIIKSSFSFLMGTVCGVYIARNYNVPNIEKLAKMGLLIAKHIEETYRKPKK | 478 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00908 | 478 | PANTHER | REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED | 27 | 259 | - | - | |
| Eupl14g00908 | 478 | Pfam | Domain of unknown function (DUF4535) | 432 | 476 | IPR027854 | - | |
| Eupl14g00908 | 478 | Pfam | zinc-binding in reverse transcriptase | 256 | 343 | IPR026960 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00908 | K27319 | short transmembrane mitochondrial protein 1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr11:19301360 | Eupl14g00908 | Eupl-Chr14:12913526 | dispersed | |
| Eupl | Eupl-Chr12:12451760 | Eupl14g00908 | Eupl-Chr14:12913526 | dispersed | |
| Eupl | Eupl-Chr14:12913526 | Eupl4g01449 | Eupl-Chr4:23533295 | dispersed | |
| Eupl | Eupl-Chr14:12857089 | Eupl14g00908 | Eupl-Chr14:12913526 | proximal | |
| Eupl | Eupl-Chr14:12913526 | Eupl14g00909 | Eupl-Chr14:12926421 | tandem |