AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00911 ATGAGCGTTGAAGAACAGATGGCTATTTTTTTCATGACCATTGGTCATAACGAAAGAAATTCAATGATACGTGATCGATTTCAACACTCGATTGAAACCATTAATCGCCACTTTAACACAGTATTAAAGGCAGTGTGTGAATTTGCAATATCGATTATCAAGCCTCCTTTTGATGTAACTCCGGGTCACATTCGCTACAATCATAAATACTGGCCATTTTTCAAGGACTGCATTGGAGCAATTGATGGGACTCACGTTAGTGTCTTCATTTCTTTAGAGAATCAAGTACCTTTCAGGGGTAGGAAAGGACCATGCACACAAAATGTAATAGCCGTATGTTCATTTAACATGCAATTTACATTTGTGCTTGCTGGATGGGAAGGAACATCAAATGATTGGAAAGTCTTTTTAGAGACAATTCATAACCCAACTAATAACTTTCCTTATCCACATCCAGACTTCCGACGTGCCGGTCAACCAAGAACAAGAAAAGAGATATTTAATCATAGACATTCTTCACTACGGAACGTGATCGAGCGGTGCTTTGAAATTTTGAAGGCTCGTTTTCCAATTCTTAAGGCGATGCCTTCATATCCATTCAAGTCTCAAATATTAATAGTTGTAACGTGCATGGCGATCCACAACTATATACGTCAGGAGACGGCAACAGATTGGTTGTTGAAGCAATATGATAATGATGGTTATGAATGTCCATAA 717 38.35 MSVEEQMAIFFMTIGHNERNSMIRDRFQHSIETINRHFNTVLKAVCEFAISIIKPPFDVTPGHIRYNHKYWPFFKDCIGAIDGTHVSVFISLENQVPFRGRKGPCTQNVIAVCSFNMQFTFVLAGWEGTSNDWKVFLETIHNPTNNFPYPHPDFRRAGQPRTRKEIFNHRHSSLRNVIERCFEILKARFPILKAMPSYPFKSQILIVVTCMAIHNYIRQETATDWLLKQYDNDGYECP 238
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00911 238 Pfam DDE superfamily endonuclease 155 215 IPR027806 -
Eupl14g00911 238 PANTHER UNCHARACTERIZED 1 224 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00911 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:12937772 Eupl5g00398 Eupl-Chr5:16002891 dispersed
Eupl Eupl-Chr14:12868466 Eupl14g00911 Eupl-Chr14:12937772 proximal