Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00913 | ATGGGGACGACGAGGACCAATTTCTACAAGAATCCTTCCTTCGTATACAACAAAGATTTCAATCTCTCCTCTGTTCTTCAAAACCTCAGAGCATACAACGTTGCCACCGGGAACGCTCCTCTCATCGAAGAGCCACAATCCATCAATCAGAAAAAGGTTCGTAAACGCAGTCCAGATCGAAAACCAAATCCTGATCGCGATGAGAGAAGTGTAGACGAGAACGACGGACCCCTCACTCATCAGAGCTACATTGAAAAGAGAAGGAAAGAAGTCAGGTCAGCTCAGGTTTATCAGGAATTGACTCCAGATGTATTGGGAAATTCCAATTCAAGTTTTCAACCTTTGGTACAATATGAAAGTGATGAAAGTACATCGTCGGGAGATCCTGAAGAAAAACAGGATGCACCAAGTTCTGATCATGTGGATGAAACTGATCATGTTAAGGAAAGAGCTGAGCAACGATTTCCAGTTCCTGGGGAACCTGTTTGTGTGGTATGTGGCAAATATGGAGAATATATATGCAATGAGACTGGTGATGATATCTGCAGTATTGATTGCAAAGCTGAGCTGCTGAAACCTCAAAATCTTGACTTGTCTGAGAGAGCGATTAGTTGCCAAGACTCTCTTACAGGATTTTCTGGACCTAAAGGCTCGTTACAGACGCCCAAGTTTAAGGAGGATACTTGGGATTTTGGCCGGCACCAATGGACCAAAAAGAGATCCAGTCTATGTTCATATGAATGTTGGAAATGTCAGAGGCCTGGCCACCTTGCAGAAGATTGTCTGGTGACTCCTTCCACTTCAACATGCAGCCAGAAGCCAGTGGGAGCTCACAACTCTAGTTCCATATCCAGAGATCTTCTTGCTCTCTACAGAAGATGCCACCAGATAGGCAAAAACATATCAACTGCAAAATGCAATATATGCCGAGGTTCATCAAGCTTGGCAATGTGCCTTGATTGTAGTACAATAATTTGTGACAGTGCAGGTCATCTGAATGAGCATATTGTTGCACATTCCTCTCATCGACAATTTTACTCCTATAAGCTCCAGCGTTTGGTGAAATGCTGTAAATCAACATGCAATGTGACAGACATCAAGGATCTTTTAGCTTGCCACTACTGCCTTGATAAAGCCTTTGACAAGTTCTATGATATGTACACTGCCACATGGAAAAGAGCTGGACTTTCAATCATCTGGGGTTCCATTTGCTGTGATGAACACTTCACTTGGCACAGGATGAATTGCTTGAGTGCAGATGTAGAAGGCAGTGGATATATTATCAGCAATCGTGCACAGAGAGACAAGATTGGTCAGATCAGTGATTTCATTTTCTGA | 1338 | 43.12 | MGTTRTNFYKNPSFVYNKDFNLSSVLQNLRAYNVATGNAPLIEEPQSINQKKVRKRSPDRKPNPDRDERSVDENDGPLTHQSYIEKRRKEVRSAQVYQELTPDVLGNSNSSFQPLVQYESDESTSSGDPEEKQDAPSSDHVDETDHVKERAEQRFPVPGEPVCVVCGKYGEYICNETGDDICSIDCKAELLKPQNLDLSERAISCQDSLTGFSGPKGSLQTPKFKEDTWDFGRHQWTKKRSSLCSYECWKCQRPGHLAEDCLVTPSTSTCSQKPVGAHNSSSISRDLLALYRRCHQIGKNISTAKCNICRGSSSLAMCLDCSTIICDSAGHLNEHIVAHSSHRQFYSYKLQRLVKCCKSTCNVTDIKDLLACHYCLDKAFDKFYDMYTATWKRAGLSIIWGSICCDEHFTWHRMNCLSADVEGSGYIISNRAQRDKIGQISDFIF | 445 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00913 | 445 | ProSiteProfiles | Zinc finger CCHC-type profile. | 248 | 261 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Eupl14g00913 | 445 | MobiDBLite | consensus disorder prediction | 117 | 153 | - | - | |
| Eupl14g00913 | 445 | PANTHER | CCHC-TYPE DOMAIN-CONTAINING PROTEIN | 3 | 445 | - | - | |
| Eupl14g00913 | 445 | MobiDBLite | consensus disorder prediction | 43 | 84 | - | - | |
| Eupl14g00913 | 445 | Gene3D | - | 142 | 198 | - | - | |
| Eupl14g00913 | 445 | Pfam | HIT zinc finger | 160 | 187 | IPR007529 | - | |
| Eupl14g00913 | 445 | MobiDBLite | consensus disorder prediction | 48 | 84 | - | - | |
| Eupl14g00913 | 445 | SUPERFAMILY | Retrovirus zinc finger-like domains | 234 | 261 | IPR036875 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Eupl14g00913 | 445 | MobiDBLite | consensus disorder prediction | 125 | 153 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00913 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:12953800 | Eupl8g01036 | Eupl-Chr8:28912403 | dispersed |