AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00919 ATGATGGTCGATCTGGGATCGTTCTCAGACGAGAAATTCGACGCGAAGAAATGGATAAACACGGCCTGCCAATCTCGCCACGCGCAGGACTCACTGGAAAAGCACTTGGCAGATCTGGAAATGAAGCTGCAGATGATGTCCGAAGAGATCGCCGCGTCTCTGGAAGAGCAGAGCAGTGGCGCTATCCTGCGTGTCCCTCGAGCTAATCGCGACGTTATCCGTCTCCGCGACGACGCCATCTCTCTCCGTAGTTCCGTTTCTGGGATCCTCCTCAAGCTCAAAAAGGCAGAGGGCTCCTCGGCTGAATCTATTGCTGCCCTTGCTAAAGTTGATACGGTCAAGCAAAGAATGGAAGCAGCCTATGAGACATTGCAGGATGCCGCAGGGTTGACTCAGTTAAGTGCTAGTGTGGAGGATGTGTTTGCTAGTGGAGATCTTCCCCGCGCTGCGGAAACGTTGGCCAACATGAGGCACTGCTTGTCTGCTGTTGGTGAGGTTGCCGAGTTTGCTAATGTTAGAAAGCAGCTCGAAGTCTTAGAGGATAGGCTAGAAGAAATGGTTCAGCCTCGACTATCAGATGCTTTATCTAATCGCAAGGTTGGTGCTGTTCAAGATTTACGGCAAATCCTCATCCGAATTGGGAGATTCAAGTCTTTAGAGCTGCACTACACAAAAATTCACCTAAAACCTATAAGGAAACTTTGGGAAGAATTTGAATCCAGACAGCGAGCTAATAAGCTTGCAAGCGAGAAGCATGAAGGAGATCGGCTAACAAGCATTACTGAGTCTTCATCTAGTTTGGTCACACTTCCATTTTCCAGTTGGTTGCCAAGTTTCTATGATGAAGTGCTACTCTATCTTGAACAGGAATGGAAGTGGTGTATGATTGCGTTTCCTGATGATTATAAAATTCTTGTTCCAAAGCTACTGATTGAAACAATGGTGACACTGAGTGCAAGTTTTATTTCCCGTATCAACCTTGCAACTGGAGATGTTGTTCCTGAAACAAGGGCATTGGCTAAAGGTATACTGGATATCTTATCTGGGGATATGCCTAAAGGTACTAAGATTCAGACTAAGCATCTCGAGGCACTGATTGAGTTGCACAACATGACAGTTGCTTTTGCAAGAAATATTCAACACTTGTTTTCGGAATCTGATCTTCAGGTTTTATTGGATTCACTAAAGGCCGTCTATTCTCCTTACGGATCATATAAACAGAGGTATGGACAAATGGAGCGTGCCATCCTCTCTTCTGAAATTGCAGGATTAGATCTTAGGGGAGCTGTTGCTCGTGGCGTGGGGGCCCAGGGAATTGAACTCAGTGAAACAGTTAGAAGAATGGAGGAATCTATTCCACAAGTCATTGTTCTTCTTGAAGCTGCTGTGGAAAGATGCATCAGCTTTACTGGAGGTTCTGAGGTGGATGAGCTTATCCTTGCACTTGATGATGTTATGTTGCAGTATATATCTACCCTGCAAGAAACCCTAAAATCCTTAAGAGCTGTATGTGGAGTTGATACTAGTTGTGATGTTGTTGGTTCAAAGAAGGAAATGGGATTGGACAAAAAGGAAGGAACTCACAATTCACGCAAAGTGGATATGGTCTCAGATGAGGAGGAGTGGTCTATTGTCCAAGGAGCACTGCAGATTCTTACAGTTGCAGACTGTCTGACCAGCAGGTCCTCAGTCTTTGAAGCTTCCCTAAGAGCTACCCTTGCTAGGCTCAGCACAAGTTTGTCTCTTTCAATATTTGGTTCTAGTTTGGATCAAAACGAATCACATGCGGTCAGTGAGGATGGAAATGGGGAATTATCTTTGCAAGGTAGGGCTGCCTTGGATGTGGCAGCGTTGCATCTTATTGATGTTCCTGAGAAAGCTAGGAAACTTTTTAGCCTTTTAGACCAGTGCAAAGATCCACGGTTTCATGCACTTCCACATGGATCTCAAAGAGTAGCGGCGTTTGTGGATACAGTGAATGAACTCGTCTATGATGTTCTCATATCGAAAGTTCGGCAACGCCTGAGCGATGTGGCTCGGTTGCCAATCTGGTCTGCGGTAGAGGAGCCAAGTGCTTTCCCTCTCCCAAGCTTCAGCGCCTACCCCCAGTCCTATGTGACCAGTGTCGGTGAATATCTTCTTACTTTACCCCAACAGTTGGAGCCACTTGCAGAGGGCATCTCTAGCAGTGATGCCAACACTGATGAAGCCCAGTTCTTCGCAACTGAATGGATGTTTAAGGTTGCGGAGGGTGCCACAGCACTTTACATGGAGCAGTTACGGGGAATTCATTATATAACTGATCGGGGAGCGCAGCAGCTGTCAGCAGATATTGAGTACCTGAGTAACGTGCTATCAGCTCTGTCTATGCCGATTCCTCCAATCCTAGCTACATTTCACACCTGCCTTTCAACTCCAAGAGACCAGCTCCGGGAGCTCGTGAAATCGGATACAGGAAGCGAGCTTGATTTTCCAACTGCCCACCTTGTGTGCAAGATCCGACGTGTGACTCTAGATCAGTGA 2523 46.53 MMVDLGSFSDEKFDAKKWINTACQSRHAQDSLEKHLADLEMKLQMMSEEIAASLEEQSSGAILRVPRANRDVIRLRDDAISLRSSVSGILLKLKKAEGSSAESIAALAKVDTVKQRMEAAYETLQDAAGLTQLSASVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANVRKQLEVLEDRLEEMVQPRLSDALSNRKVGAVQDLRQILIRIGRFKSLELHYTKIHLKPIRKLWEEFESRQRANKLASEKHEGDRLTSITESSSSLVTLPFSSWLPSFYDEVLLYLEQEWKWCMIAFPDDYKILVPKLLIETMVTLSASFISRINLATGDVVPETRALAKGILDILSGDMPKGTKIQTKHLEALIELHNMTVAFARNIQHLFSESDLQVLLDSLKAVYSPYGSYKQRYGQMERAILSSEIAGLDLRGAVARGVGAQGIELSETVRRMEESIPQVIVLLEAAVERCISFTGGSEVDELILALDDVMLQYISTLQETLKSLRAVCGVDTSCDVVGSKKEMGLDKKEGTHNSRKVDMVSDEEEWSIVQGALQILTVADCLTSRSSVFEASLRATLARLSTSLSLSIFGSSLDQNESHAVSEDGNGELSLQGRAALDVAALHLIDVPEKARKLFSLLDQCKDPRFHALPHGSQRVAAFVDTVNELVYDVLISKVRQRLSDVARLPIWSAVEEPSAFPLPSFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISSSDANTDEAQFFATEWMFKVAEGATALYMEQLRGIHYITDRGAQQLSADIEYLSNVLSALSMPIPPILATFHTCLSTPRDQLRELVKSDTGSELDFPTAHLVCKIRRVTLDQ 840
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00919 840 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 2 838 IPR019335 GO:0006886(InterPro)|GO:0006890(PANTHER)|GO:0007030(PANTHER)|GO:0017119(InterPro)|GO:0017119(PANTHER)
Eupl14g00919 840 Pfam Golgi complex component 7 (COG7) 4 835 IPR019335 GO:0006886(InterPro)|GO:0017119(InterPro)
Eupl14g00919 840 Coils Coil 29 56 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00919 K20294 conserved oligomeric Golgi complex subunit 7