Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00921 | ATGGACGACTCCACTCCATGTGGAATAGTGATGCAACTGAAGATCAACGGGATGAGGACGATTGGTGATGGTCTCAGTAGCAAGGAGGAGCGGGTCCAGCAATGTGAAGGGAGCCTCTATGATGCCAAAGTCAGCAACATCATAGTGAACGGAACTTGGTGCATCCCACCTGCCATCCTTCAGGTCTTTCAACTTGCTGGCCTTCCCATTGATCACCTGCATGGTCTTCCATCATCTGTGGCTGATGTCAGGATATGGAAGCCCACGGTGAAGGCAACTTCTCGGTCCACTCTGCCTTTGAAGCTATTAGGCCTAAGCACCCTACAGTCCGATGGTTTAGATGGGTATGGAACCCCTCCATTCATCCGAGGACTGCTGCCACTGCTTGGAAACTCTTTCATGGAGCCATCCCGATCTTGCTTCCAAGACCCTAAGCATCTGGGATATTCTATGATGGACCGCTTGATCTTGAGTCGCTTTGGACTTCAATATAGTCTTGGTAAAGCCCCATCAATTCGATCCTGCTGGTGGACTCCCCCTCCTTTGGGCGTAGTCAAGCTCAATTGTGATGGAGCTTCTTGTGGTAATCCGGGTCCAGGTGCGCTTGGAGTCATCTTTAGGGACTCCTATGGTACTTTCAAAGGCGCTTTAGCAGCTGGCCTTGGAGAAGTTTCCAACTTCATTGCCGAATGTCAAGCGATTGTCGAAGGGGCCGACCTTGCGCTTTCAAAAGGATGGAATTGTATTTGGATCGAATCTGACTCTGAGGCGATGATAAAGGCTTTCCTTAAGAATGATATTCCTTGGAAGGTCAAGGAAAAATGGGACCGAATCAAATTTTGTTTCCATCGGCTAAGATTGACCTTCACTTGGAGGGAGGTAAACTTTAGCGCTGATCTTTGTGCCAAGCAAGCGATCTCCATGCCGATTGGCTCGCGTATCTGGTGGGTGGAGAGACCTTCTTTTCTGTTGACGGTTGAGAATCCGTTTTTAACCTACTACAGATTTGCGCATTGA | 1017 | 48.87 | MDDSTPCGIVMQLKINGMRTIGDGLSSKEERVQQCEGSLYDAKVSNIIVNGTWCIPPAILQVFQLAGLPIDHLHGLPSSVADVRIWKPTVKATSRSTLPLKLLGLSTLQSDGLDGYGTPPFIRGLLPLLGNSFMEPSRSCFQDPKHLGYSMMDRLILSRFGLQYSLGKAPSIRSCWWTPPPLGVVKLNCDGASCGNPGPGALGVIFRDSYGTFKGALAAGLGEVSNFIAECQAIVEGADLALSKGWNCIWIESDSEAMIKAFLKNDIPWKVKEKWDRIKFCFHRLRLTFTWREVNFSADLCAKQAISMPIGSRIWWVERPSFLLTVENPFLTYYRFAH | 338 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00921 | 338 | PANTHER | OS05G0353850 PROTEIN | 163 | 316 | IPR053151 | - | |
| Eupl14g00921 | 338 | Pfam | Reverse transcriptase-like | 188 | 305 | IPR002156 | GO:0003676(InterPro)|GO:0004523(InterPro) | |
| Eupl14g00921 | 338 | Gene3D | - | 184 | 309 | IPR036397 | GO:0003676(InterPro) | |
| Eupl14g00921 | 338 | SUPERFAMILY | Ribonuclease H-like | 184 | 310 | IPR012337 | - | |
| Eupl14g00921 | 338 | CDD | RNase-H-like | 187 | 303 | IPR044730 | - | |
| Eupl14g00921 | 338 | ProSiteProfiles | RNase H type-1 domain profile. | 181 | 311 | IPR002156 | GO:0003676(InterPro)|GO:0004523(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00921 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr10:16711458 | Eupl14g00921 | Eupl-Chr14:13128346 | dispersed | |
| Eupl | Eupl-Chr10:21313629 | Eupl14g00921 | Eupl-Chr14:13128346 | dispersed | |
| Eupl | Eupl-Chr11:14451619 | Eupl14g00921 | Eupl-Chr14:13128346 | dispersed | |
| Eupl | Eupl-Chr11:37610743 | Eupl14g00921 | Eupl-Chr14:13128346 | dispersed | |
| Eupl | Eupl-Chr12:23679162 | Eupl14g00921 | Eupl-Chr14:13128346 | dispersed | |
| Eupl | Eupl-Chr14:13128346 | Eupl1g01917 | Eupl-Chr1:41219369 | dispersed | |
| Eupl | Eupl-Chr14:13128346 | Eupl6g01543 | Eupl-Chr6:29741590 | transposed |