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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00928 ATGAAATTTGGGAAGAGATTGAAACACCAAATTCGGGAGAGCTTGCCGGAGTGGCAAGACAAGTACTTATCTTACAAGGATCTGAAGAAGCTCGTCCGGCTCATCTCTTCTTCTTCGTCGTCGTTGGGTGAGTCGGTGAAGGCCGAAGCAGAGTTTTGGTTCTTGTTGAACATCGAGATCGACAAGTTCAATGCCTTCTTCATGGAGCAAGAAGAGGATTTTATAATCCGACACAAAGAGTTGCAACAGAGGATTCAGATTGTGATTGCCACATTTGGAGCAAGTGGGAGCCAACCTTCAGAGACAAATTATAGTGAGGAGATGAGAAAGATCAGAAATGTGATTATCAATTTCCATGGTGAAATGGTGCTCTTGGAGAATTACAGCAACATCAATTATACAGGACTGGCTAAGATCTTGAAGAAGTACGACAAGCGTACCGGAGGTTTGTTACGCCTACCGTTCATTCAAAAGGTGTTGCAGCAACCCTTCTTTACAACTGAGCTTCTGTCAAAGCTTGTTAAGGAATGTGAGAGCACCATAGATGCAGTTTTCCCAACTGTGGAGGAGGAAGGGAGAAGAGAAGAAAGAGTAGGAAGAGTAACTACAACTGTACTCGGACAGAGCATTTTCAGGAATACGGTCGCTGCCCTTGTGACCATGCAAGAGATGAGAAGGGGGAGCTCTACTTACAGTCAATTTTCTCTTCCTCCTCTAAACTTGCCAGATTCTGATCTCATTCAATCCCTCCAACTTAATTCTCCTATTCCCATTCTCTAA 780 43.85 MKFGKRLKHQIRESLPEWQDKYLSYKDLKKLVRLISSSSSSLGESVKAEAEFWFLLNIEIDKFNAFFMEQEEDFIIRHKELQQRIQIVIATFGASGSQPSETNYSEEMRKIRNVIINFHGEMVLLENYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLQQPFFTTELLSKLVKECESTIDAVFPTVEEEGRREERVGRVTTTVLGQSIFRNTVAALVTMQEMRRGSSTYSQFSLPPLNLPDSDLIQSLQLNSPIPIL 259
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00928 259 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 247 IPR031142 GO:0016036(InterPro)
Eupl14g00928 259 CDD SPX-AtSPX1-like 2 146 - -
Eupl14g00928 259 ProSiteProfiles SPX domain profile. 1 157 IPR004331 -
Eupl14g00928 259 Pfam SPX domain 100 158 IPR004331 -
Eupl14g00928 259 Pfam SPX domain 1 36 IPR004331 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00928 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:13242555 Eupl14g00929 Eupl-Chr14:13247866 tandem