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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00931 ATGGATGAACAATTTTGGAAAAAGGCATTCAATGCAGTAGCAATGGTAGAGCTAATCATAAAAGTTTTACGGTTGGTAAACTCAGATAAACCTACGATGAGGTATCTGTTTGATGCATTATGTACAGCTAAAGGCATAATTAAGCAGTTCTTGGGGTTGAGAAGAGCTGCTAGTATTTGCAAGATTATCAACAAAAGATGGAAGGACCAGCTCCACACTGACTTGCATGCTGCTGCATACTTTTTGAACTCGTATTATCTTTATGAACCATCAAGCTTTAAGGATGAAAATAAAATCTGTTATCCAGAGTTTTGTGTTCATAAAGTGATTGCCAATTTGTTTCCAAACCCAACAGATCAAGCGACTATAACTTTGGAGCTAGGAAGGTTTCAATCCCGACCAGGAGCTATGAGATCAGAAGCAGTCAGGATAGCTGCAAAAGAAGGGTGTCCTAGTTAA 459 38.56 MDEQFWKKAFNAVAMVELIIKVLRLVNSDKPTMRYLFDALCTAKGIIKQFLGLRRAASICKIINKRWKDQLHTDLHAAAYFLNSYYLYEPSSFKDENKICYPEFCVHKVIANLFPNPTDQATITLELGRFQSRPGAMRSEAVRIAAKEGCPS 152
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00931 152 PANTHER OSJNBA0013A04.12 PROTEIN 2 140 - -
Eupl14g00931 152 SUPERFAMILY Ribonuclease H-like 3 93 IPR012337 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00931 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:13366349 Eupl5g01004 Eupl-Chr5:31567689 dispersed
Eupl Eupl-Chr14:13366349 Eupl14g00938 Eupl-Chr14:13480900 proximal