Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00953 | ATGTCTCGGACGGGCGTTGCTCTCAGCAAAGGCTTCTCGACTCGACCTATAACTGTTTTGGAGTTGCGAGGGCAGAAACTTGAGCTTCGACTTCTCGAAATCGCTGAACGAGAGGAGGCTGATGAATTTATAATCGGGCTCCCTATATCTGGTGATGGGAAGGAGACGCCACAGTCGAACAAAGTTCGTAGTGTTGCCGGAAGGCTCGCCGTTAGAGCCGCAGAGAGGGGTTGGAGAGTATACCTGCAGGATGAACATGGGACATCAACAGAGGCCCTTGATTACATGATTGATATGGGCCTCAACAAATCTGCTCGCCAAGGAAAAATTGATGCATATGCTGCCATGGAACTGAACTTGTTCTTCCCAGGCAGTTGGAACTTCAAGAAAAACTTCGACAAGGTCCACCCAAGGACTTGGATTTTTTCCCAGAAGAACTTCAGGGCTGACAACGTATTGCTGATCCAAGAAGCAGTTGGAACTTCAAAAGGAACTTCAACAAGGTCCACCCAAGGACTTGGAATTTTCCCCAGAAGAACTTGA | 543 | 48.25 | MSRTGVALSKGFSTRPITVLELRGQKLELRLLEIAEREEADEFIIGLPISGDGKETPQSNKVRSVAGRLAVRAAERGWRVYLQDEHGTSTEALDYMIDMGLNKSARQGKIDAYAAMELNLFFPGSWNFKKNFDKVHPRTWIFSQKNFRADNVLLIQEAVGTSKGTSTRSTQGLGIFPRRT | 180 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00953 | 180 | PANTHER | POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN | 2 | 118 | IPR005227 | GO:0000967(PANTHER)|GO:0006364(InterPro) | |
| Eupl14g00953 | 180 | Gene3D | - | 1 | 121 | IPR037027 | GO:0006139(InterPro) | |
| Eupl14g00953 | 180 | SMART | rnase-8s | 1 | 92 | IPR006641 | GO:0006139(InterPro) | |
| Eupl14g00953 | 180 | Pfam | Holliday junction resolvase | 2 | 116 | IPR005227 | GO:0006364(InterPro) | |
| Eupl14g00953 | 180 | CDD | YqgF | 3 | 116 | IPR005227 | GO:0006364(InterPro) | |
| Eupl14g00953 | 180 | SUPERFAMILY | Ribonuclease H-like | 2 | 117 | IPR012337 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00953 | K07447 | putative pre-16S rRNA nuclease [EC:3.1.-.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:13861341 | Eupl14g00953 | Eupl-Chr14:13883927 | proximal |