AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00955 ATGGATCTCTCTTCTCTCACAGAAGCCCAACAACAACAGCTCCAACAACTCCACCAACAGTTCCAACAACACCAGCTTCAACAACAACAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAACAAGAACAACAGCAACAACAACAACAACAGCAACAACTCCACCACCAACAGCAAGACTTAGCCTCTCAAGCCTACGATCCCTCACAAGTACAAGCCTACGACCAATCAAACCAAGCATACTACCCTTACCCCCAATACCCACAACAACAACAACAACACTACCCATACTACCATCCTGACTACGCCAATGCCTACCAACAACAACAGCCCCAACAATCCCAACCCCAACCCCAACCCCAATCCCAACCCCAACCCCAACCCTCGCAGACCGACTCGACCCCGGTCCAACCACCGGGGATTTCGATCCCGCCGGATGCATCACAAATCTTGGCCGCACAAGGGCAGCATCAGCAGCAAAATGCGTATTATCCACAAGGGGTTGTGGACCAGCAACAGCAGCCGCAGCAGCAACAGCAGAACTCAACGTCGTACCCGGTTCCGCCTGGGTTGAACCCGGCTGCGGCCGCGGCGGTGGCTGCGTTGTCGCAGTTAACGCAGTTTGCTGGGACGATGGATGCGGCGGAGAGAGCAATGGCCGGGTTGCAGGAACGGCAGTGGCAGGCAAAGAATGGGGGATACGGGCCCATGCCGATGCCACCTCCTCCACATGGAGGGTTTCAGCATGGACCATTTCCGGTTCGCCCGGGGGCCGAGAGATCTCCATACAGGGGTGGTGGTAGAAGAGGTGGGGGGCCATTCAGAGGTGGTGGTCGAGGCAATTTTGGTCACCGTCCCCCTAGATCAGATGGCTCAGCGCCTCATTTTCGTGGTAGGGGACGTGGACGTGGTAGGGGTGGTGGCCGCCGTTTTCCACCACATGCTGCCTCATCATCTTCATATCCAGAAACTATGCACGTCCAAGAACCAGTTTCAGCACATGGAGAGGAAGCTCCATCAGATATGGCACAAGGAGAGGCACCACAGTCAGGTCCAGTATCTTCATCCGTTACAGCACCGGGACAAGCACCACAATCAGCACCTGCACATGGGCCGGCATCTTCAACCAGGCGACCTCCTCAAATTGCTTGGTGCGAGCTTTGTAGGGTTGACTGCACCAGTTTGGAAATCCTTGAGCAGCACAAGAATGGAAAGAGGCATAAAAAGAACTTGCTGAGATTTGAGGAGTTACAGAATGCCAGAAATCCCGTGCCCATGCCTGTGCCTATGCCTATGCCTATGCCTGTTCCTGTGTCCGTGCCCGTGCCCGTGGCTGTGTCCGTGCCCGTGCCTGTGTCTGCGCTCGTCCCTGTGCCCGAAATACAGAACGAGCAAATACTGATGCCTGAATCCAAGTCAGAAGACATGGCGCAACCTGAGAATGTCCAGGAGGGTGAAAAGAGCAAGCCACCTGCTGCAGAAAATTTGCCTACTGAAGCTGCTCCTAATGAAGATAAAATGGAAACTGAGCAGCAAAATGACTTGGTGGAGCAACCTGAGGTTGCGGAGGCTGAACAATTCGAAGGATCGGCAAGGAGGCGTAGGATGGATCGGTTTGATTCTCGGAAGCGTGGGCTCAAGAGGAAGATGAGGGGTGGTCGGGGTGGTAAGCGTATGAGGATTTCAGAACGGCCAAGTAGGCCGATCGAGCCTCCCAAAGAGGTGGTGCCCATAATCTGTGATTTGTGCAACGTTAAGTGCGACACACAAGCTGTTTTCGACTGTCATCTGGCTGGTAAAAAGCACATTTCTAAGCTAAAGCGATTCCAAGGCCACCAAGCTATGTTTGGGGCTGTCGGGCTTCAAGCTCTTTACCCCCCTAACCCCAATACCCAATCGATTTTCATCCCTCAAGTACATCAACAGGCTCAAGTACATCAACAGGCCTATTACGTTCCTCAGGGCTCTCTCCCCCAGTCGATGGGTCATGGGCCTCAAGCTCCACAAGTGCCAGCAGGTTCAGAGACCCAAGCTAAACAAGAATTTGAAACTCAACCACCACAGGTTACTCCCGATGGAAGCGAAAAAGCTGTTGCACTGGAACCTGAAGGCCAACAGCAAGTTGCCGCAGTGGAGCTGGAAGGCCAACAAGCCGAGGGGATCAAATCTGAGAATGGTGTTTCAGAGCATGAAGGAAAGGTATTTGATCCTCCCCTGGATGGGTCAGTCCTGCCAACATCAGAGAACGCTGCTACGGGATCTGAGCCTGTTCCAGAAATGAAGGATGCTGTTATGGTCCCAGATTATGGAGTTACCTCTTCTGAGCATGTTGTCTTGCCTGGACTTGACATTAAAATGGAGGAGCCGGGATCGAAGAACGAAGAATCAACTGAGCAAGAGATGGGTTTGCAGTAA 2415 53.13 MDLSSLTEAQQQQLQQLHQQFQQHQLQQQQQQQQQQQQQQQQEQQQQQQQQQQLHHQQQDLASQAYDPSQVQAYDQSNQAYYPYPQYPQQQQQHYPYYHPDYANAYQQQQPQQSQPQPQPQSQPQPQPSQTDSTPVQPPGISIPPDASQILAAQGQHQQQNAYYPQGVVDQQQQPQQQQQNSTSYPVPPGLNPAAAAAVAALSQLTQFAGTMDAAERAMAGLQERQWQAKNGGYGPMPMPPPPHGGFQHGPFPVRPGAERSPYRGGGRRGGGPFRGGGRGNFGHRPPRSDGSAPHFRGRGRGRGRGGGRRFPPHAASSSSYPETMHVQEPVSAHGEEAPSDMAQGEAPQSGPVSSSVTAPGQAPQSAPAHGPASSTRRPPQIAWCELCRVDCTSLEILEQHKNGKRHKKNLLRFEELQNARNPVPMPVPMPMPMPVPVSVPVPVAVSVPVPVSALVPVPEIQNEQILMPESKSEDMAQPENVQEGEKSKPPAAENLPTEAAPNEDKMETEQQNDLVEQPEVAEAEQFEGSARRRRMDRFDSRKRGLKRKMRGGRGGKRMRISERPSRPIEPPKEVVPIICDLCNVKCDTQAVFDCHLAGKKHISKLKRFQGHQAMFGAVGLQALYPPNPNTQSIFIPQVHQQAQVHQQAYYVPQGSLPQSMGHGPQAPQVPAGSETQAKQEFETQPPQVTPDGSEKAVALEPEGQQQVAAVELEGQQAEGIKSENGVSEHEGKVFDPPLDGSVLPTSENAATGSEPVPEMKDAVMVPDYGVTSSEHVVLPGLDIKMEEPGSKNEESTEQEMGLQ 804
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00955 804 MobiDBLite consensus disorder prediction 229 379 - -
Eupl14g00955 804 Gene3D Classic Zinc Finger 567 609 - -
Eupl14g00955 804 Gene3D Classic Zinc Finger 364 413 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 737 760 - -
Eupl14g00955 804 PANTHER OS06G0651300 PROTEIN-RELATED 1 630 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 106 146 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 670 691 - -
Eupl14g00955 804 Pfam Zinc-finger of C2H2 type 384 407 IPR013087 -
Eupl14g00955 804 Pfam Zinc-finger of C2H2 type 579 602 IPR013087 -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 780 804 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 168 190 - -
Eupl14g00955 804 SMART ZnF-U1-5 384 414 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Eupl14g00955 804 SMART ZnF-U1-5 575 609 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Eupl14g00955 804 Coils Coil 7 53 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 168 188 - -
Eupl14g00955 804 SUPERFAMILY beta-beta-alpha zinc fingers 567 609 IPR036236 -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 556 570 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 347 372 - -
Eupl14g00955 804 SUPERFAMILY beta-beta-alpha zinc fingers 372 412 IPR036236 -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 466 570 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 654 698 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 235 249 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 25 83 - -
Eupl14g00955 804 MobiDBLite consensus disorder prediction 537 555 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00955 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:13912080 Eupl4g01219 Eupl-Chr4:18561276 dispersed
Eupl Eupl-Chr14:13912080 Eupl11g00886 Eupl-Chr11:11335770 transposed