AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00958 ATGGCTTCTCCTCCATTTCAGATGGAGGATCAGACGGACGAGGATTTCTTTGATAAGCTTGTTGACAATGAATTCGGGACGTCAGATATGGATCCTAGTTTTGCGGATGGTGTCGATTCCGATGAGGTGAGAGCATTCTCGAATCTGAGCATTGGTGATGTCGGTACTGTTTCAGAAGATTCCGGTGGCGAAGGGGAAAAGCAGTCTGGGGAAGTGATTTTGCCGTCATCGTCAGATGCAGCTAAGAAGAACATTTTGGTTCCAGAAGAGAGCACTTCGCTCGTAACCTCCAATTCGTCTGTTTCCAGTAATGCTGCCGAGTCCAGCAATGCCATGACAGGAGCGGATGTTGTATCGGATTATGATACGAGCAAAAGCAGTGGATCAAGGAGTACAGGTGTTAAGGAGGTGCAATGGAGTTCATTTAGTGCAACTGATACGGACTTCTTCACTGAGTTGGGAGACAGTTCAGTAGATCCATTTGCGATTGCGGCTGATAATCCGAACCCTACATCTAGTAGTACAGAAGATGTGGCTGCTGATTTGACAACATCGTTTACTTCTACACAACATCAAGTTGGACAAGCCTATGGAGCAGTGACTGAACAGACGGCAGCAGTGACTGAACAGACGGCAGATGGACAGAATTGGGAAAATCTATATCCTGGATGGAGGTATGATCCCAATACTGGGGAGTGGCATCAAGTGGACAGTTATGATGCAACGGCATATTCCCATCAGGGGAGTTTTGAAGGCCAGGCTCAGACAGCAGGTGAAGAAGCTGTTTTGGAACAGAGATCCGATGTTTCATATTTGCAGCAAACAGCCCAGTCGGTTATGGGAACCGTAGCTGAGGTTTGTACAACTGGTAGTGTCTCGAACTGGAATCAGGTCCCACAAGGGAACGGCACAGAGTACCCAGCGCATATGGTGTTTGATCCTCAGTACCCAGGTTGGTACTACGACACAATCGCCCAAGAATGGCGCCTTTTGGAATCTTACACTCCAGTTGTTCAGTCAACGAATACTTCTCATGACCAGCAAATTCAGAATGAGAATGCTTCGACAGGTGGTTTCTTCCCCGGCAAAGATCATAGCCAATATGGTGAGTATGGACAAGTTAAAAGTTATGGATCACAAGGTCAGGGAGGTCAAGACCATGGTGGGGATTGGGCTGGGGCTGGGGCTGGGGCTGGGGCCAACTATGTTCAGCAGAATACGAATATGTGGCAGCCTGAAATAGTTGCTAATACTGAGGCTGTGGCTGGTTTTAGTGACCACCAGAAATCAGAGAACTTTTACGGTTCAAGGGGTCCTGTAAACAACTACACGGAACAACAAACGGGTTTTAAACCCCTAGGAACTGCTTCTTTGTATGACCAAACAAGTCACAATTATGATGGCAATAACGGGGTGACTGGGTTTCAAAGCTTCGTGCCTGCTGAGAACTTCTCTCAGCAGTTTAATCAGCCAAAGGTGGAGCAGAACCAGCAGATGCATTTCTCACATGATTACTATGGCAGTCAGAAATCAGGAAATTACTACCATCAACCATCTCAGACTAGCACTCAATTTCCATATGCTCCCAGTGAGGGGAGGTCATCTGCAGGTCGTCCTCCTCATGCTCTGGTTACTTTTGGGTTTGGTGGAAAACTCATAGTCATGAAAGATAGCAGTTCGTTTGTTGCAAACTCGGCATATGGAAACCAGGACTCTGTAGGAGGCTCGGTTTCTATTCTCAACTTGATGGATGTCGTCATGGAAAAAAATGACGCAAGCATTGGTTTTGGTGCTCGTGATTACTTCCGTACTTTGTGCCAACAATCCTTTCCTGGCCCTCTAGTTGGTGGAAATGTTGGAAGCAAAGAATTAAACAAATGGATTGATGAGAGGATTACAAATTGTGAATCTCCCAACATGGACTACAGAAAAGGAGAACTTTTGAGGTTGCTTCTCTCTTTGCTGAAAATAGCTTGTCAGCATTATGGAAAACTTCGATCTCCTTTTGGTACTGATCCAGCATTGAAGGAAAGTGATCGTCCGGAATCAGCAGTGGCAAAACTTTTTGCATCGGCTAAAAGGAGTGGTGCTGCTCAATTGACCGGGTATGGTGCCCTTACTCACTGCTTGCAGAACTTGCCTTCTGAAGGGCAAATTCGGGCAACTGCTGTTGAGGTACAGAACCTTCTTGTTTCTGGTAGAACAAAAGAGGCTCTCCAGTGTGCACAAGAAGGTCAGTTGTGGGGACCTGCGCTTGTTCTTGCAGCACAACTTGGTGATCAGTTTCATGTTGATACCATGAGGCAAATGGCACTTCACCAGTTAGTAGCAGGATCTCCTTTACGGACACTGTGCCTGCTAATTGCAGGGCAACCAGCAGATGTGTTTTCTGCAGACAGCACAACTAGCAGTGGTGTACCTGGTGCTGTAAATATGTCTCAACAACCTGCACAGATTGGTGCCAATTGTATGCTAGATGATTGGGAAGAGAATTTGGCCGTCGTAGCTGCTAACAGAACAAAAGGTGATGAGCTTGTAATTGTTCATCTTGGAGATTGCCTATGGAAGGAGAGAGGCGAGATTACTGCTGCGCACACCTGCTACTTGGTTGCAGAAGCAAACTTCGAGTCATATTCTGACAGTGCAAGACTGTGTCTTATTGGTGCAGACCACTGGAAATTCCCCCGAACCTATGCTACTCCTGAGGCTATCCAGAGGACAGAATTGTATGAATATTCGACGGTGCTTGGAAATTCTCAGTCCATCCTGCTACCATTTCAGCCATATAAGCTTATCTATGCCTACATGTTAGCTGAAGTGGGGAAAGTTTCTGATTCATTAAAGTACTGTCAAGCAATATTAAAGTCTCTGAAAACTGGTCGAACACTTGAAGTAGACACATTGAAACAATTGGTATCGTCTCTCGAGGAGCGCATAAAAACCCACCTGCAGGGTGGATATAGCACAAACCTGGCCCCAGCAAAACTGGTGGGTAAATTGCTCCCCTTTATTGATAGATCTATTCATCGCATGATTGGAGCCCCCCCACCACCTGTGCCATCATCATCACAGAGCAGCATTCAAAACAATGAACATGATATCCATCGAGTGGGCCCAAGAGTCACAAATAGTCAATCAACGATGGCTATGTCATCATTAATGCCTTCAGCATCAGTGGAACCCATAAGTGAATGGATGGATGATAGCAATAGAATGAGTATGCAGAATAGAAGCATTTCAGAGCCAGATTTCGGTAGAACCCCAAGACAGGGTCAGGTCGATACATCAAAGAAAGCAGCCTCGTCTGATGCACAGGGCAAATCATCAGTCTCAGGTGGGCCATCTCGCTTTGGCAATTTTGGGTCGCAGCTCCTCCAAAAGACCATGGGATGGGTTGCAAGATCCCGCCCAGACCGCCAGGCTAAATTGGGTGAGAAAAATAAATTCTATTATGACGAAAAGCTCAAGCGATGGGTAGAGGAAGGCGCTGAACCTCCAGCGGAAGAAACAGCCCCACCGCCGCCCCCAACAACTGCAACATTCCAGAATGGAATGCCAGAATACAGCATAAAAGATGCATTCAAAAGCGAAAGCTTGCTTGCTAATGGAAGGGCAGAAATCAAGAGCCCGACTCCTTTGGAACGTAATTCAGGGATCCCACCCATCCCCAGCTCAAACCAATTCTCAGCTCGTGGAAGGATGGGTGTTCGATCAAGGTACGTTGACACCTTCAACAAAGGTGGTGGGACCCCAGCAAACTTATTCCAGTCACCTACTGTTCCAGCTGCAAAACCTGGGGGTGGTGCCAATGCCAAGTTTTTCATCCCCACTGCCACTGCCACTGCCACAGCCCCAGCCCCAGCTGAACATTCAGCAGATGCAACTGGAGAAAACATGCAAGATCCTGCTTCCACCACTAAAGAAGTCCCTTCGACATCAGCAACGAAGGATTCATTTTTCTCATCTCCACCACCACCATCATCATCCTCCATGCAACGGTTCCCGAGCATGGATAACATTGCCCCCAAGGGAATGGGGGTAATCGGTAATGGCAACGGCTCCCTTTCTTCCCGCTCGAGGCGAACAGCATCATGGAGTGGAAGCCTTTCCGATGCACGTAATCCCCCTAGGATGACCGAAATAAAACCTCTAGGAGAGGTGTTGGGGATGCCCCCATCATCTTTTATGCCTAGTGACCCATCATCGATGCGTCTGCCAATGAACGGTGGCAGTTTTGGGGATGACCTTCATGAGGTGGAACTCTGA 4266 47.28 MASPPFQMEDQTDEDFFDKLVDNEFGTSDMDPSFADGVDSDEVRAFSNLSIGDVGTVSEDSGGEGEKQSGEVILPSSSDAAKKNILVPEESTSLVTSNSSVSSNAAESSNAMTGADVVSDYDTSKSSGSRSTGVKEVQWSSFSATDTDFFTELGDSSVDPFAIAADNPNPTSSSTEDVAADLTTSFTSTQHQVGQAYGAVTEQTAAVTEQTADGQNWENLYPGWRYDPNTGEWHQVDSYDATAYSHQGSFEGQAQTAGEEAVLEQRSDVSYLQQTAQSVMGTVAEVCTTGSVSNWNQVPQGNGTEYPAHMVFDPQYPGWYYDTIAQEWRLLESYTPVVQSTNTSHDQQIQNENASTGGFFPGKDHSQYGEYGQVKSYGSQGQGGQDHGGDWAGAGAGAGANYVQQNTNMWQPEIVANTEAVAGFSDHQKSENFYGSRGPVNNYTEQQTGFKPLGTASLYDQTSHNYDGNNGVTGFQSFVPAENFSQQFNQPKVEQNQQMHFSHDYYGSQKSGNYYHQPSQTSTQFPYAPSEGRSSAGRPPHALVTFGFGGKLIVMKDSSSFVANSAYGNQDSVGGSVSILNLMDVVMEKNDASIGFGARDYFRTLCQQSFPGPLVGGNVGSKELNKWIDERITNCESPNMDYRKGELLRLLLSLLKIACQHYGKLRSPFGTDPALKESDRPESAVAKLFASAKRSGAAQLTGYGALTHCLQNLPSEGQIRATAVEVQNLLVSGRTKEALQCAQEGQLWGPALVLAAQLGDQFHVDTMRQMALHQLVAGSPLRTLCLLIAGQPADVFSADSTTSSGVPGAVNMSQQPAQIGANCMLDDWEENLAVVAANRTKGDELVIVHLGDCLWKERGEITAAHTCYLVAEANFESYSDSARLCLIGADHWKFPRTYATPEAIQRTELYEYSTVLGNSQSILLPFQPYKLIYAYMLAEVGKVSDSLKYCQAILKSLKTGRTLEVDTLKQLVSSLEERIKTHLQGGYSTNLAPAKLVGKLLPFIDRSIHRMIGAPPPPVPSSSQSSIQNNEHDIHRVGPRVTNSQSTMAMSSLMPSASVEPISEWMDDSNRMSMQNRSISEPDFGRTPRQGQVDTSKKAASSDAQGKSSVSGGPSRFGNFGSQLLQKTMGWVARSRPDRQAKLGEKNKFYYDEKLKRWVEEGAEPPAEETAPPPPPTTATFQNGMPEYSIKDAFKSESLLANGRAEIKSPTPLERNSGIPPIPSSNQFSARGRMGVRSRYVDTFNKGGGTPANLFQSPTVPAAKPGGGANAKFFIPTATATATAPAPAEHSADATGENMQDPASTTKEVPSTSATKDSFFSSPPPPSSSSMQRFPSMDNIAPKGMGVIGNGNGSLSSRSRRTASWSGSLSDARNPPRMTEIKPLGEVLGMPPSSFMPSDPSSMRLPMNGGSFGDDLHEVEL 1421
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 1162 1184 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 513 539 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 1297 1336 - -
Eupl14g00958 1421 CDD ACE1-Sec16-like 610 982 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 1350 1373 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 1281 1421 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 89 112 - -
Eupl14g00958 1421 Pfam Vesicle coat trafficking protein Sec16 mid-region 541 663 IPR024340 -
Eupl14g00958 1421 Pfam Sec23-binding domain of Sec16 726 993 IPR024298 -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 513 530 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 1206 1234 - -
Eupl14g00958 1421 PANTHER RGPR-RELATED 1 1386 IPR024880 GO:0006914(InterPro)|GO:0007030(PANTHER)|GO:0012507(PANTHER)|GO:0048208(InterPro)|GO:0070971(PANTHER)|GO:0070973(PANTHER)
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 50 112 - -
Eupl14g00958 1421 Gene3D - 537 973 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 1218 1232 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 1242 1261 - -
Eupl14g00958 1421 MobiDBLite consensus disorder prediction 1075 1121 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00958 K20353 COPII coat assembly protein SEC16