Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl14g00962	ATGGATGATTCTAGGGTTTCTGACGAACCTCGTTCGCGAGCTGGAATCATCTCGAAGATCCGCCTAGAGAACTTCATGTGCCACAGCAGCTTACAGATCGAACTCGGAGAGTGGATCAATTTCATTACCGGACAGAACGGAAGCGGTAAAAGTGCCATACTCACGGCATTGTGTGTTGCTTTCGGGTGCCGAGCGAAAGGCACCCAAAGGGCGTCTACATTGAAAGATTTCATAAAGACTGGTTGCAGCTATGCTATTGTTCATGTGGAAGTAAACAATCAAGGGGAAGATGCTTTTAAGCCAGAAATTTATGGTGATGTTATAATCATAGAACGCAGGATTTCAGAATCAACAAGCTCCACTGTTTTAAAGGATCACCAAGGAAAAAGAGTTGCTAGTCGGAAAGAGGATCTTCGTGAACTTGTAGAGCATTATAATATTGATGTTGAAAATCCATGTGTAATAATGGGTCAAGACAAAAGCAGAGAATTTTTGCATTCAGGGAACGACAAAGATAAATTCAAGTTCTTTTTCAAGGCTACGCTTCTTCAACAAGTAAATGATCTATTACAAAGTATTAGGAGTGAGCTGGATGCTGCAAATGCACAGGTTGATGAACTGGAGTCTTCAATAAGACCTATATTGAAGGAACTTAATGAGCTGCAAGGGAAGATCAAAAGCATGGAACATGTTGAAGAAATATCTCAACAAGTACAACAGTTAAGGAAGAAACTGGCTTGGTCGTGGGTATATGATGTGGACAAGCAAATCCAGGAACAAGTTGCCAAGCTCGAAAAGTTGAAAGAACGTATACCTACTTGCCAAGCTAGAATTGATCGACAACTGGTTAAGGTAGAGGAATTGAAGGAACGTCTTACTCAGAAAAGAACTCAAATTGCATGTATGATGGAGAGGACGTCAGAAGTGCGGAGAATGAAGGATGAATTGCAGCAAAACCTTGCCTTGGCTACGAAAGAAAAATTTGAGCTAGAAGAAGAACACATGCGTAAAACTAACCTTATTCAAAAGATGGTCAAGCGTGCTAGGTTGCTTGAGCAGCAAGTTCATGATATTCAAGAGCAAGATGTTAAGAATATGCAGGCTGAAGAATGTGAGATAGAGGAACAACTGAAGGGACTCCAGGATGAGGTTGATGCAGCTAATTTAACTCTTACGAGGTTGAAGGAAGAAGAGAATGCCTTATCTGAAGAGCTATCGATGGCAATGAATGCAATCAAGAATATTGCTATTGAGATAGAAGAGAATGAAAGGAAGTATCGTGAGATCTGTTCTCACATCCGTGAGCTTCAGCAACATCGAACCAACAAGGTAACAGCTTTTGGAGGAGAGCGAGTAATCGATCTTTTACGTGTAATCGAGAGACATCATAAGAGATTCAAAAGGCCCCCTATTGGTCCTATTGGGGCTCATGTGACATTGGTTAATGGTGATATATGGGCTTTGTCTGTGGAAAATGCCATTGGGAAGTTGCTAAATGCTTTTATTGTGACGGATCATAAAGATTCTCTTCTTTTGCGTGGATGTGCTAGGGAAGCGAAGTATCACCGCCTTCAGATTATCATATATGATTTTTCCAGACCACAGTTGAATATTCCGAGTCACATGGTTCCTCAAACGAAGCACCCAACTACTCTTTCTGTTATACATAGCGACAATCCTACCATATTCAATGTCTTGGTAGATATGGGTCACGCTGAGAGGCAAGTGCTTGTAAGTGATTATGAAGTGGGAAAATCAGTTGCATTTGACCAAAGGATTTCCAACCTTAAGGAGGTTTATACGTTAGATGGATATCGAATGTTCTCTCGCGGTTCAGTCCAAACCATTCTCCCTCCAAACAAGAGGATTAGAGGTGGCCGACTATGCCGTTCATTTGATGATCAAATTAAGGGTCTTGAGAAAGATGCATCAATGGTACAAGAACTAGATCGACAAGGCCGGGGGAGGAAAAGGGATGCAGAGGAAGGCCTTCAGGATCTTCAAGAGAGACTACGAAATGTGAAGAAGCGGCGTCTGAACGCAGAGAAGGATTTGATGTCTAAGCAACTAACACTCCGAGATGTGAAGAATTCATATGCTGCTGAGGCTAGTTCACCCGCCACATCTAATGTTGACGAGCTTCGTCAAGAAATCTCGAAAGTCCAAGAAGAAATACAAGAACAGGATATCTTCTTAGAAAAGTTCCAAAAGAGAATGACGGGGGCAGAAGTGAAAGCCAATGATTTAAAATTATCATTTGAGAATCTATGCGAGTCAGCAAAAGGGGATCTTGATGCCTTTGAGGAAGCAGAACGTGAGTTAATGCTGATCGAAGAAAATCTACGCTCAGCAGAAACGGAGAAGTCTCATTATGAAGGGGTCATGCATAAAAAGGTTCTTCCTGATATCACAGAAGCAGAGGCACAATATCAGGAGCTTCAACTCAATCGTCAAGAGAGCTGCAAGAAGGCATCTATTATTTGTCCTGAGAGTGAGATTGAAGCTTTAGGAGGCTGTTCAGGAAGCACTCCGGAGCAACTTAGTGCTCACTTAAATCGACTAAATCAGAGACTTCAGCACGAGAGCCAGAGATATGCCGAATCTATTGACGATCTCAGACTATTGTATGAGAAAAAAGAGCGCAAAATTTTAAGAAAACAGCAAACTTATGAAGCTTTTCGTGAGAAGTTGAATGCATGCCAGAAAGCCCTGGATTTACGTTGGAGCAAATTTCAAAGGAATGCAAGTCTTTTGAAACGACAGTTGACTTGGCAATTTAATGGCCATTTAAGGAAGAAAGGAATCAGTGGGCACATTAAGGTTAGTTATGAAGAGAAGACACTCTCAGTGGAGGTAAAGATGCCGCAAGATGCATCTAGCAACACTGTTCGTGATACTAGGGGGCTTTCAGGTGGGGAACGCTCTTTTTCTACTTTATGCTTTGCATTAGCTCTTCATGAATTGACGGAGGCTCCGTTCCGAGCGATGGACGAGTTTGATGTGTTTATGGATGCGGTTAGCCGGAAAGTCAGCTTGGACACCCTTGTGGATTTTGCGTTAGCACAAGGGTCCCAATGGATATTCATCACCCCACATGATATCAGCATGGTGAAGCCAGGGGACAGAGTCAAGAAGCAGCAAATGGCAGCTCCTCGTTCTTGA	3162	42.35	MDDSRVSDEPRSRAGIISKIRLENFMCHSSLQIELGEWINFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGCSYAIVHVEVNNQGEDAFKPEIYGDVIIIERRISESTSSTVLKDHQGKRVASRKEDLRELVEHYNIDVENPCVIMGQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLLQSIRSELDAANAQVDELESSIRPILKELNELQGKIKSMEHVEEISQQVQQLRKKLAWSWVYDVDKQIQEQVAKLEKLKERIPTCQARIDRQLVKVEELKERLTQKRTQIACMMERTSEVRRMKDELQQNLALATKEKFELEEEHMRKTNLIQKMVKRARLLEQQVHDIQEQDVKNMQAEECEIEEQLKGLQDEVDAANLTLTRLKEEENALSEELSMAMNAIKNIAIEIEENERKYREICSHIRELQQHRTNKVTAFGGERVIDLLRVIERHHKRFKRPPIGPIGAHVTLVNGDIWALSVENAIGKLLNAFIVTDHKDSLLLRGCAREAKYHRLQIIIYDFSRPQLNIPSHMVPQTKHPTTLSVIHSDNPTIFNVLVDMGHAERQVLVSDYEVGKSVAFDQRISNLKEVYTLDGYRMFSRGSVQTILPPNKRIRGGRLCRSFDDQIKGLEKDASMVQELDRQGRGRKRDAEEGLQDLQERLRNVKKRRLNAEKDLMSKQLTLRDVKNSYAAEASSPATSNVDELRQEISKVQEEIQEQDIFLEKFQKRMTGAEVKANDLKLSFENLCESAKGDLDAFEEAERELMLIEENLRSAETEKSHYEGVMHKKVLPDITEAEAQYQELQLNRQESCKKASIICPESEIEALGGCSGSTPEQLSAHLNRLNQRLQHESQRYAESIDDLRLLYEKKERKILRKQQTYEAFREKLNACQKALDLRWSKFQRNASLLKRQLTWQFNGHLRKKGISGHIKVSYEEKTLSVEVKMPQDASSNTVRDTRGLSGGERSFSTLCFALALHELTEAPFRAMDEFDVFMDAVSRKVSLDTLVDFALAQGSQWIFITPHDISMVKPGDRVKKQQMAAPRS	1053

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl14g00962	1053	Coils	Coil	851	896	-	-
	Eupl14g00962	1053	Coils	Coil	183	210	-	-
	Eupl14g00962	1053	Pfam	RecF-RecN-SMC N terminal domain	17	1044	IPR003395	-
	Eupl14g00962	1053	SUPERFAMILY	Smc hinge domain	427	612	IPR036277	GO:0005515(InterPro)\|GO:0005524(InterPro)\|GO:0005694(InterPro)\|GO:0051276(InterPro)
	Eupl14g00962	1053	Coils	Coil	711	752	-	-
	Eupl14g00962	1053	Coils	Coil	250	333	-	-
	Eupl14g00962	1053	Coils	Coil	657	684	-	-
	Eupl14g00962	1053	PANTHER	STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6	10	1051	-	GO:0000724(PANTHER)\|GO:0003684(PANTHER)\|GO:0003697(PANTHER)\|GO:0005634(PANTHER)\|GO:0030915(PANTHER)\|GO:0035861(PANTHER)
	Eupl14g00962	1053	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	17	381	IPR027417	-
	Eupl14g00962	1053	Gene3D	-	16	214	IPR027417	-
	Eupl14g00962	1053	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	17	1043	IPR027417	-
	Eupl14g00962	1053	Coils	Coil	377	411	-	-
	Eupl14g00962	1053	Coils	Coil	803	823	-	-
	Eupl14g00962	1053	Coils	Coil	341	361	-	-
	Eupl14g00962	1053	Gene3D	-	764	1048	IPR027417	-
	Eupl14g00962	1053	Coils	Coil	767	787	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl14g00962	K22804	structural maintenance of chromosomes protein 6

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Eupl	Eupl-Chr14:14104478	Eupl5g00579	Eupl-Chr5:23593166	dispersed

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl1g00804	.	23	175	Structural Maintenance of Chromosomes family	AT5G15920	23.81	1.75e-07	53.9
	Eupl10g00665	.	893	1009	Structural Maintenance of Chromosomes family	AT5G15920	26.812	9.19e-06	48.1
	Eupl5g00579	.	1	1042	Structural Maintenance of Chromosomes family	AT5G15920	68.84	0.0	1479.0
	Eupl2g00004	.	45	175	Structural Maintenance of Chromosomes family	AT5G15920	24.306	7.52e-07	50.8
	Eupl7g00005	.	45	175	Structural Maintenance of Chromosomes family	AT5G15920	22.917	2.74e-06	48.1
	Eupl12g00526	.	19	123	Structural Maintenance of Chromosomes family	AT5G07660	36.036	1.01e-08	58.2
	EuplCTG_503g00010	.	45	175	Structural Maintenance of Chromosomes family	AT5G15920	23.611	2.19e-06	49.3
	Eupl14g00962	.	6	1057	Structural Maintenance of Chromosomes family	AT5G61460	66.192	0.0	1388.0