AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00964 ATGGATAGGTATTTAAAGGGGATCAAAGGGCATTTGACCGTTATAGGAGGCAACGGTCAGACGGTCTTTGAAAGACCGTCCATGCACTATGGACAATCTTTGAAGGACCGTTGGTGTGCTCCAAAAATCGTGAGCACTTGTGTACGTGCCGAGAGCTCATTGGCTTGTGATTGTGTGATAGAAGTTTTACTCATAGTGGGTCCACCCTTTGACAACGAGATGCCCATCACTATGATCTTCCTTCGACGCATGCAAATGGGTCAAACCGCCGTGGATTTCAATGCTTCTACGTATCTACTTTGGAATAAATGTCTCCTCAACAACGTGGGAAGGAGAACACTGACCGAATCAATGCTTGGCCCACCGTTTGGTGGATCCACGGATATTTCTACTGGTTGTGTTTATCCCGTGACGTTGACCATTGATTTTTTGATAGATGATTTTCTTTCTCGTGTAGAAAAATTCGGTATATTAGCGCCTTGGAGATCTTTGAATGGGAAATGGGAACCATCTGATCTTGATATCAACGAGTGTACTGAAGAGGCATTCAAAACCTGCCATTCCGATGCGATTTGCCGTAATTCAATTGGGAGTGTTAGCTGCTCTTGTAAACGTGGCTACCGTGGTGACGGTTATATACAAGGAACCGGCTGCACCCGTGATATTAAATTACTTCTAGGCCTCGTTATAGAGGACTTTAAATTTTTTGAAGTCCCCCCTCCAACTCTCGAGGCTAATACGGGGATCTCTTGGGATGTGTACGTGCTCCCGGGAGGTTGCCCGTATCGGGGTGGTATTCGTAGTGATCCGTATGCTAGTGTCCAGCTATTGTGA 834 45.8 MDRYLKGIKGHLTVIGGNGQTVFERPSMHYGQSLKDRWCAPKIVSTCVRAESSLACDCVIEVLLIVGPPFDNEMPITMIFLRRMQMGQTAVDFNASTYLLWNKCLLNNVGRRTLTESMLGPPFGGSTDISTGCVYPVTLTIDFLIDDFLSRVEKFGILAPWRSLNGKWEPSDLDINECTEEAFKTCHSDAICRNSIGSVSCSCKRGYRGDGYIQGTGCTRDIKLLLGLVIEDFKFFEVPPPTLEANTGISWDVYVLPGGCPYRGGIRSDPYASVQLL 277
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00964 277 Gene3D Laminin 160 219 - -
Eupl14g00964 277 ProSiteProfiles EGF-like domain profile. 174 210 IPR000742 -
Eupl14g00964 277 CDD EGF-CA 174 210 - -
Eupl14g00964 277 FunFam Fibrillin 2 171 214 - -
Eupl14g00964 277 Pfam EGF domain 184 212 IPR024731 -
Eupl14g00964 277 SMART egfca-6 174 219 IPR001881 GO:0005509(InterPro)
Eupl14g00964 277 SUPERFAMILY EGF-Laminin 174 211 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00964 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:14180899 Eupl8g00734 Eupl-Chr8:15920758 dispersed
Eupl Eupl-Chr14:14180899 Eupl14g01299 Eupl-Chr14:29816308 transposed