Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00964 | ATGGATAGGTATTTAAAGGGGATCAAAGGGCATTTGACCGTTATAGGAGGCAACGGTCAGACGGTCTTTGAAAGACCGTCCATGCACTATGGACAATCTTTGAAGGACCGTTGGTGTGCTCCAAAAATCGTGAGCACTTGTGTACGTGCCGAGAGCTCATTGGCTTGTGATTGTGTGATAGAAGTTTTACTCATAGTGGGTCCACCCTTTGACAACGAGATGCCCATCACTATGATCTTCCTTCGACGCATGCAAATGGGTCAAACCGCCGTGGATTTCAATGCTTCTACGTATCTACTTTGGAATAAATGTCTCCTCAACAACGTGGGAAGGAGAACACTGACCGAATCAATGCTTGGCCCACCGTTTGGTGGATCCACGGATATTTCTACTGGTTGTGTTTATCCCGTGACGTTGACCATTGATTTTTTGATAGATGATTTTCTTTCTCGTGTAGAAAAATTCGGTATATTAGCGCCTTGGAGATCTTTGAATGGGAAATGGGAACCATCTGATCTTGATATCAACGAGTGTACTGAAGAGGCATTCAAAACCTGCCATTCCGATGCGATTTGCCGTAATTCAATTGGGAGTGTTAGCTGCTCTTGTAAACGTGGCTACCGTGGTGACGGTTATATACAAGGAACCGGCTGCACCCGTGATATTAAATTACTTCTAGGCCTCGTTATAGAGGACTTTAAATTTTTTGAAGTCCCCCCTCCAACTCTCGAGGCTAATACGGGGATCTCTTGGGATGTGTACGTGCTCCCGGGAGGTTGCCCGTATCGGGGTGGTATTCGTAGTGATCCGTATGCTAGTGTCCAGCTATTGTGA | 834 | 45.8 | MDRYLKGIKGHLTVIGGNGQTVFERPSMHYGQSLKDRWCAPKIVSTCVRAESSLACDCVIEVLLIVGPPFDNEMPITMIFLRRMQMGQTAVDFNASTYLLWNKCLLNNVGRRTLTESMLGPPFGGSTDISTGCVYPVTLTIDFLIDDFLSRVEKFGILAPWRSLNGKWEPSDLDINECTEEAFKTCHSDAICRNSIGSVSCSCKRGYRGDGYIQGTGCTRDIKLLLGLVIEDFKFFEVPPPTLEANTGISWDVYVLPGGCPYRGGIRSDPYASVQLL | 277 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00964 | 277 | Gene3D | Laminin | 160 | 219 | - | - | |
| Eupl14g00964 | 277 | ProSiteProfiles | EGF-like domain profile. | 174 | 210 | IPR000742 | - | |
| Eupl14g00964 | 277 | CDD | EGF-CA | 174 | 210 | - | - | |
| Eupl14g00964 | 277 | FunFam | Fibrillin 2 | 171 | 214 | - | - | |
| Eupl14g00964 | 277 | Pfam | EGF domain | 184 | 212 | IPR024731 | - | |
| Eupl14g00964 | 277 | SMART | egfca-6 | 174 | 219 | IPR001881 | GO:0005509(InterPro) | |
| Eupl14g00964 | 277 | SUPERFAMILY | EGF-Laminin | 174 | 211 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00964 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:14180899 | Eupl8g00734 | Eupl-Chr8:15920758 | dispersed | |
| Eupl | Eupl-Chr14:14180899 | Eupl14g01299 | Eupl-Chr14:29816308 | transposed |