Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00969 | ATGGAGGTATGCTATGATAGGGCAGCAAGAGGGCATGTACGAGCAGGAAGCTGCATGGAGTGCATGATGGGTTGTGCCAGCAGATTAGATGGTGGAGATAACTACCTGCATGTGTGGAGATTAAACCGTTGGGCAGTAAGTGGAGGGACCATCGTAGAGTTCAGATCTGGCCGTGGATGGAGAAGAGCTTTACTGGCGTTAATGGTGGAAGCCGATGAAGGTATAGACCGAAGGGGGTTACAGACGATTGATTTGAAGGATGAATGGAAGAATCTAACGGTCAGGGTCCTAGATGGAATGGAGAGTGGTGATTGGTTAAGGCCTAGTGCCTCTGCTTCTTTCTTAAGAGAACTACTTATTGTTGATTTGGCAGAATTCAATTGTTTTCGTATTGTCCTTTGTGTGAGATCGGCTTCGGTGGTCCGTGTTCTTTGGTTCCAGATCAACTCGGGCAAAAAATCGAAGAAATATATGAGGAACACAGTTAAAGACCTTATCATTCTCAAGAATCTTGGGATGGGTACTAAACCAAGGAAAGCTCCAGCTATTCTAGAGTGCAGATGGAAAGCACTGGGAAGAGGGGTTATTAAATTGAATTGTGATGGTGCAGCTAAAGGTAATCCAGGTATGGGAGGTATTGGAGTCACATTCAGAGATTCTAATGGAAATATTGTTGGAGTATTAGTTGAGAACCTCGGGGTTGTCACTAATCACATGGCGGAATGCTGTGCTATTTGCTATGGTGCTAAATGTGCAGTAGACAAGGGTAGGACTAAAATTTGGGTGGAATCGAATTCAGAAGCAGCTATCAAATCTTTTCTAAGTGGAGACATTCCTTGGAAGATTAAAGGTTTGTGGGATTTAATCAAACCGAAATTGGAATGGATTTGTTTAACATCAACATGGAGGGAAACTAATTTTAGTGCGGATAAGTGTGCTAACAAGGCTTGCCGACTTCCTATTGGTCATAAGAAATGGTGGGACCAAAGGCCGAAATTCTTGAGTTGTATTGAGGACCCTTTGAGGTCTTATTATCGTTTTGTATCTTGA | 1050 | 43.05 | MEVCYDRAARGHVRAGSCMECMMGCASRLDGGDNYLHVWRLNRWAVSGGTIVEFRSGRGWRRALLALMVEADEGIDRRGLQTIDLKDEWKNLTVRVLDGMESGDWLRPSASASFLRELLIVDLAEFNCFRIVLCVRSASVVRVLWFQINSGKKSKKYMRNTVKDLIILKNLGMGTKPRKAPAILECRWKALGRGVIKLNCDGAAKGNPGMGGIGVTFRDSNGNIVGVLVENLGVVTNHMAECCAICYGAKCAVDKGRTKIWVESNSEAAIKSFLSGDIPWKIKGLWDLIKPKLEWICLTSTWRETNFSADKCANKACRLPIGHKKWWDQRPKFLSCIEDPLRSYYRFVS | 349 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00969 | 349 | Pfam | Reverse transcriptase-like | 199 | 316 | IPR002156 | GO:0003676(InterPro)|GO:0004523(InterPro) | |
| Eupl14g00969 | 349 | PANTHER | OS05G0353850 PROTEIN | 164 | 338 | IPR053151 | - | |
| Eupl14g00969 | 349 | CDD | RNase-H-like | 198 | 314 | IPR044730 | - | |
| Eupl14g00969 | 349 | Gene3D | - | 195 | 319 | IPR036397 | GO:0003676(InterPro) | |
| Eupl14g00969 | 349 | SUPERFAMILY | Ribonuclease H-like | 195 | 321 | IPR012337 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00969 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:14355653 | Eupl9g01449 | Eupl-Chr9:29932518 | dispersed | |
| Eupl | Eupl-Chr11:37610743 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr12:2714859 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr12:5424582 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr14:30690811 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr1:14421240 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr3:30831466 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr6:3536109 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr6:30345547 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr11:13655311 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr8:34805197 | Eupl14g00969 | Eupl-Chr14:14355653 | transposed | |
| Eupl | Eupl-Chr14:86110 | Eupl14g00969 | Eupl-Chr14:14355653 | wgd |