Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00970 | ATGATTTTGAAGAAATTAAAGGGAAAATCTATTGGTCAGGGTAGAGCGAAGAAGGTCGTCATTTCGGCCCCTATCAAGGATGCTCCCATTTTTGTTGTGGGTGTCAATGAAAAGGAATACAAGCCGGACATCAACATTGTATCAAATGCTAGCTGCACCACCAACTATCTTGCTCCCGCTGCCACACTTGTCATCAATGACAGATTTGGCATTGTTGAGGGTCTCATGACCATTGTCTACTCCACAGCCAGCTCAAACCACTATGGTGGCACTTTCCAAAATACACAAGGTCTCATCTTTGTTGTTGACAGCAATGACAGGGACCATGTGGCTGAGGCAAGGGATGAGCTCCACAGGATGCTGAATGAGGATGAGTTACGAGATGCTGTGTTGCTCGTTTTTGCAAATACGCAAGATCTACCAAATGCAATGAATGCTGTTGAAATTACTGATAAGCTGGGATTGCATTACTTGTGTCAGAGACATTGGTTGAGGGGATCCAGACAGTGGTGGTGCATTGTAGCGTTTGGAGGAGGAAGAGGCAGTGCTAGGCAGTTTTTAAAGGGAGCAGCGGTGATGAGAGTGACGCCCAGCAACTGGTTGAAGACCATGAACCAGGATGCCGATGAGGCCCTTGGGAGCCTAACGTCCAAGCTTGTTCAAGGAACTCAGAAGTGCATACGGGTTCACCAAGGCTTATGTTTATTGGGTGGCATGACTTTCATCCTACTGCAATTCAATGTTCTTATGCCATTTACTTATAGATTTTGA | 771 | 45.78 | MILKKLKGKSIGQGRAKKVVISAPIKDAPIFVVGVNEKEYKPDINIVSNASCTTNYLAPAATLVINDRFGIVEGLMTIVYSTASSNHYGGTFQNTQGLIFVVDSNDRDHVAEARDELHRMLNEDELRDAVLLVFANTQDLPNAMNAVEITDKLGLHYLCQRHWLRGSRQWWCIVAFGGGRGSARQFLKGAAVMRVTPSNWLKTMNQDADEALGSLTSKLVQGTQKCIRVHQGLCLLGGMTFILLQFNVLMPFTYRF | 256 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00970 | 256 | PANTHER | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE | 12 | 85 | IPR020831 | GO:0004365(PANTHER)|GO:0005829(PANTHER)|GO:0006096(PANTHER)|GO:0016620(InterPro) | |
| Eupl14g00970 | 256 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 91 | 163 | IPR027417 | - | |
| Eupl14g00970 | 256 | FunFam | ADP-ribosylation factor 1 | 82 | 178 | - | - | |
| Eupl14g00970 | 256 | Pfam | ADP-ribosylation factor family | 92 | 163 | IPR006689 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Eupl14g00970 | 256 | ProSitePatterns | Glyceraldehyde 3-phosphate dehydrogenase active site. | 50 | 57 | IPR020830 | GO:0016620(InterPro) | |
| Eupl14g00970 | 256 | Gene3D | - | 2 | 68 | - | - | |
| Eupl14g00970 | 256 | SMART | arf-sub-2 | 11 | 195 | - | - | |
| Eupl14g00970 | 256 | PRINTS | Glyceraldehyde-3-phosphate dehydrogenase signature | 74 | 90 | IPR020831 | GO:0016620(InterPro) | |
| Eupl14g00970 | 256 | PRINTS | Glyceraldehyde-3-phosphate dehydrogenase signature | 46 | 64 | IPR020831 | GO:0016620(InterPro) | |
| Eupl14g00970 | 256 | PRINTS | Glyceraldehyde-3-phosphate dehydrogenase signature | 11 | 24 | IPR020831 | GO:0016620(InterPro) | |
| Eupl14g00970 | 256 | Gene3D | - | 85 | 221 | IPR027417 | - | |
| Eupl14g00970 | 256 | ProSiteProfiles | small GTPase Arf family profile. | 1 | 208 | - | - | |
| Eupl14g00970 | 256 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 13 | 65 | IPR036291 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00970 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:14378578 | Eupl5g00323 | Eupl-Chr5:9474804 | dispersed | |
| Eupl | Eupl-Chr14:14378578 | Eupl4g00674 | Eupl-Chr4:10222956 | transposed | |
| Eupl | Eupl-Chr14:14378578 | Eupl12g01296 | Eupl-Chr12:29620101 | transposed |