AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00971 ATGGGTTCATCCCCGACTCCAATTTCCCCCAGAAAGCTTCGATCTGATCTCTATTACTTCTCATACCAAGATGATTCGAGCATCCCTTTAGTGATTTCTGTTCTTGCTTCTCTCCTTGAGAGAACCATGACTAGGAATGAACGGATTGCAAGAAAATGTACGTGGGCACTGTCGAAGGACGCTAGAACTCGTGTTTTCGATTCCTATCAGATGCCGGACATGACGATTCAATCCTTTCTCGAGAGAATTTTTCGATATACCCGTGTTGGACCACCGGTATATGTTGTCGCGTATGTGTATATTGATCGGTTATGCCAGATCCATCCTGGGTTTCGAATCGCCTCTGCGAATGTACATAGACTTCTCATTACTACAATCATGGTGGCTTCTAAATTTGTGGAAGACATGAATTATAGAAATTCTTATTTTGCGAGGGTCGGGGGATTAACGACGAAAGAGATGAACAAATTAGAGTTGGATTTTCTGTTCTTGATGGGTTTTAAGTTGCATGTTAATGTGAGCGTGTTCGAGAGCTACTGTTGTCATCTAGAGAGAGAAGTAAGCATTGGTGGAGGGTATCAAATAGAACGGACATTGCGATTAATGTGCTCGGGAGAATTCAAATCCAAGGAGCAAGACGAAATGGATCTTAATCAACTCGCATTTGTTATCGGATGTAGTTCATAA 687 42.07 MGSSPTPISPRKLRSDLYYFSYQDDSSIPLVISVLASLLERTMTRNERIARKCTWALSKDARTRVFDSYQMPDMTIQSFLERIFRYTRVGPPVYVVAYVYIDRLCQIHPGFRIASANVHRLLITTIMVASKFVEDMNYRNSYFARVGGLTTKEMNKLELDFLFLMGFKLHVNVSVFESYCCHLEREVSIGGGYQIERTLRLMCSGEFKSKEQDEMDLNQLAFVIGCSS 228
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00971 228 Gene3D - 22 219 - -
Eupl14g00971 228 Pfam Cyclin 31 169 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Eupl14g00971 228 PIRSF PREG 7 222 IPR012389 -
Eupl14g00971 228 CDD CYCLIN-AtCycU-like 62 187 - -
Eupl14g00971 228 SUPERFAMILY Cyclin-like 78 170 IPR036915 -
Eupl14g00971 228 PANTHER UNCHARACTERIZED 22 202 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00971 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:14465430 Eupl2g00249 Eupl-Chr2:3008494 dispersed
Eupl Eupl-Chr14:14465430 Eupl14g00973 Eupl-Chr14:14475690 proximal
Eupl Eupl-Chr14:181450 Eupl14g00971 Eupl-Chr14:14465430 wgd