Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00975 | ATGCCCTACTCACCAGAGAGAAACCCTAGACCGCAATTGAAGAGGCCTCCGAGCTGGCCAGACCTCTGGTTCAAAGGAAAAGCTCTCAAGCATGTGGTTTTCAAGATGCAGCTCGATTCTCTCACCACCGCAACACCAGAGAGACCAACACCAGCACCCCAACAGAAAGAAACCATAACCCTAGATGATTCTCCGGGGACCAACCTGACTTCTCTCTTATCTGACGAGCTTCTTCTTCGGATCTTCTCCAAGCTCCCAGACTCGCAACGAAACCCTAATTCGCTCGTATGCAAGCGATGGATGATTCTGCAAGGTCGTCTGGTTCGCTCCGTCAAGCTCCTCGACTGGTTTTTTCTCGAATCAGGTCGGCTTCTTTCTCGGTTCCCTAATCTCACTGACGTTGATCTCGTTCGCGCCTGTATTGAGTCGCCGAAGAATTCCGGAATCTTGTTGACTAATCGTTTAATCACGCTTCATCTCGATTCTGATTACTTGGTGGGTCCCTTTATCCGTGAGGACAATTTGCTGCCGTTGGATTCGATTGATCGAGGTCTACGAATTCTCGCCCGTGGATGCCCTAATTTACGGAAACTTGTTCTCATTGCTGCTACGGAGAAGGGGCTTTCGAGTGTCGCCGAAGAGTGTCCGACGTTGCAGGAATTGGAGCTGCACCGGTGCACGGATCTCTCCTTACGTGGGATATCTGCTTGCCAGAATTTACAGATCTTGAAATTGGTTGGCATTGTTGATGGATTTTACGGTACAGTGATTTCGGATATTGGATTGACGATCTTGGCGCACGGATGTAAACGGCTGGTAAAGCTCGAGTTGAGCGGGTGCGAGGGTAGTTATGATGGGATTAGAGCAATTGGCCAATGCTGCCACATGCTGGAGGAGCTCACACTTTGCAACCACATGATGGATGAGGGGTGGATGGCTGGGTTGTCATTCTGTGGAAATTTGAAGACTTTGAAGCTTCAGTCATGCAAGAGGATCGATCTAAATCCTGGGCCAGTCGAGCATTTGGGGTCTTGCCCAACTCTTGAAGGGTTGCATCTGCAGCGGTGCCAATTGCGCAATAAGCAGAGTATGGCTGCATTGTTTCAGGTGTGCAGCGCTGTTAGGGAGATTGTTTTTCAGGACTGTTGGGGATTGGACAATGAAATTTTTGGCGTTGCAAGTACTTGCAGGAGGGTAAAGATTATATCCTTGGAAGGATGCTCGTTGCTAACAACAGAAGGTCTTGAGTCAGTAATTCTTTCTTGGGTGGAACTTCAAAGGCTTAGAGTAGTCTCATGTAACAATATAAGGGACAGTGAAGTCACTCCTGCATTATCAAGTTTGTTTTCTGTCCTTAAAGAGTTGAAATGGCGACCAGATTCCAGATCTGTTCTCTCATCAAGTCTTGCAGGGACTGGAGTGGGAAAGAAAGGTGGTAGATTTTTTAAGAGGGTTTGA | 1458 | 47.94 | MPYSPERNPRPQLKRPPSWPDLWFKGKALKHVVFKMQLDSLTTATPERPTPAPQQKETITLDDSPGTNLTSLLSDELLLRIFSKLPDSQRNPNSLVCKRWMILQGRLVRSVKLLDWFFLESGRLLSRFPNLTDVDLVRACIESPKNSGILLTNRLITLHLDSDYLVGPFIREDNLLPLDSIDRGLRILARGCPNLRKLVLIAATEKGLSSVAEECPTLQELELHRCTDLSLRGISACQNLQILKLVGIVDGFYGTVISDIGLTILAHGCKRLVKLELSGCEGSYDGIRAIGQCCHMLEELTLCNHMMDEGWMAGLSFCGNLKTLKLQSCKRIDLNPGPVEHLGSCPTLEGLHLQRCQLRNKQSMAALFQVCSAVREIVFQDCWGLDNEIFGVASTCRRVKIISLEGCSLLTTEGLESVILSWVELQRLRVVSCNNIRDSEVTPALSSLFSVLKELKWRPDSRSVLSSSLAGTGVGKKGGRFFKRV | 485 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00975 | 485 | MobiDBLite | consensus disorder prediction | 42 | 64 | - | - | |
| Eupl14g00975 | 485 | Gene3D | - | 69 | 105 | - | - | |
| Eupl14g00975 | 485 | Gene3D | Ribonuclease Inhibitor | 106 | 249 | IPR032675 | - | |
| Eupl14g00975 | 485 | PANTHER | UNCHARACTERIZED | 71 | 455 | - | GO:0019005(PANTHER)|GO:0031146(PANTHER) | |
| Eupl14g00975 | 485 | SMART | LRR-CC-2 | 345 | 370 | IPR006553 | - | |
| Eupl14g00975 | 485 | SMART | LRR-CC-2 | 269 | 293 | IPR006553 | - | |
| Eupl14g00975 | 485 | SMART | LRR-CC-2 | 215 | 240 | IPR006553 | - | |
| Eupl14g00975 | 485 | SMART | LRR-CC-2 | 396 | 421 | IPR006553 | - | |
| Eupl14g00975 | 485 | SUPERFAMILY | RNI-like | 254 | 455 | - | - | |
| Eupl14g00975 | 485 | SUPERFAMILY | RNI-like | 112 | 247 | - | - | |
| Eupl14g00975 | 485 | FunFam | F-box protein At5g51380 | 67 | 333 | - | - | |
| Eupl14g00975 | 485 | SUPERFAMILY | F-box domain | 64 | 125 | IPR036047 | GO:0005515(InterPro) | |
| Eupl14g00975 | 485 | Gene3D | Ribonuclease Inhibitor | 251 | 336 | IPR032675 | - | |
| Eupl14g00975 | 485 | Gene3D | Ribonuclease Inhibitor | 340 | 468 | IPR032675 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00975 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr13:9581915 | Eupl14g00975 | Eupl-Chr14:14516823 | dispersed | |
| Eupl | Eupl-Chr14:14516823 | Eupl14g00977 | Eupl-Chr14:14546350 | proximal | |
| Eupl | Eupl-Chr5:49497089 | Eupl14g00975 | Eupl-Chr14:14516823 | transposed | |
| Eupl | Eupl-Chr14:245969 | Eupl14g00975 | Eupl-Chr14:14516823 | wgd | |
| Eupl | Eupl-Chr14:14516823 | Eupl14g01077 | Eupl-Chr14:18736821 | wgd |