AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00980 ATGAGGAACGATCTAGTGAAGTTGTACGGAGGTTTCGAGTTGCCTGTCCTTGGACTTGGCTCCGCTGCCTTCCCGTACGATAGCGAGAAAGTTGAACGAGCAATACGGACGGCCGTGAAGTTGGGTTACAGGCATTTTGACACCGCTAAGATATACGGTTCGGAGCCTGCAGTTGGGAGGGCTCTAATGGAGGAGATTCATGATCAGACGGTGACGAGAGAAGAAATTTTCGTTACTTCTAAGCTGTGGGGGTCCGATCACCGTGACCCCGTTTCAGCACTTAAGCAAAGCCTCGAGATCTTGGGTATGGAATATGTGGACATGTACCTTATACACTGGCCAGCCAAACTCAAGGAGTGGGCAAGTTATGCTGTGCCTAAGGAAGATGACTTTGAAGAGTTGGACATGGAATCAACATGGGCAGGGATGGAGAAATGCTTGGATTTGGAGCTTTGCAAGTCCATTGGTGTCAGTAATTTCTCTTGCAAAAAGATCCAACGGCTATTAGAACATGCATCTGTCCCTCCAGCAGTGAATCAGGTGGAGATGCATCCCATGTGGAGGCAGAAGAAGCTTAGAGAGTTTTGTGGGGAGCAGAAGATCCATGTGAGTGCTTATTCACCTCTTGGGGCCCCAGGGAATCCATGGGGATCAATGGCTGTGGTAGAGAACCCTGTCATCAAATCAATTGCTCTAAAACACAAAGCAACCCCAGCTCAGGTTGCCCTAAGTTGGGGATTATCAAAGGGAGCAAGTGTGATAACAAAGAGCTTCAATGAAGAGAGGATGAAGGAGAACATGGCAGCTGTAGAGCTGAGATTGGACAATGAGGATTTGATTGAGATTGAGAGATTGGAGGAGAGGAAGATCATGAGAGGAGAATTTCTTGTTAATGCAACAACTAGTCCATACAAGACAATTCAAGATCTATGGGATGATGAGATATGA 948 46.94 MRNDLVKLYGGFELPVLGLGSAAFPYDSEKVERAIRTAVKLGYRHFDTAKIYGSEPAVGRALMEEIHDQTVTREEIFVTSKLWGSDHRDPVSALKQSLEILGMEYVDMYLIHWPAKLKEWASYAVPKEDDFEELDMESTWAGMEKCLDLELCKSIGVSNFSCKKIQRLLEHASVPPAVNQVEMHPMWRQKKLREFCGEQKIHVSAYSPLGAPGNPWGSMAVVENPVIKSIALKHKATPAQVALSWGLSKGASVITKSFNEERMKENMAAVELRLDNEDLIEIERLEERKIMRGEFLVNATTSPYKTIQDLWDDEI 315
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00980 315 SUPERFAMILY NAD(P)-linked oxidoreductase 7 288 IPR036812 -
Eupl14g00980 315 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491(InterPro)
Eupl14g00980 315 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491(InterPro)
Eupl14g00980 315 PRINTS Aldo-keto reductase signature 96 114 IPR020471 GO:0016491(InterPro)
Eupl14g00980 315 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491(InterPro)
Eupl14g00980 315 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491(InterPro)
Eupl14g00980 315 PIRSF AKR 1 309 IPR020471 GO:0016491(InterPro)
Eupl14g00980 315 ProSitePatterns Aldo-keto reductase family signature 1. 42 59 IPR018170 GO:0016491(InterPro)
Eupl14g00980 315 ProSitePatterns Aldo-keto reductase family signature 2. 143 160 IPR018170 GO:0016491(InterPro)
Eupl14g00980 315 Gene3D - 3 315 IPR036812 -
Eupl14g00980 315 Pfam Aldo-keto reductase family 17 286 IPR023210 -
Eupl14g00980 315 PANTHER ALDO-KETO REDUCTASE 11 289 IPR020471 GO:0004032(PANTHER)|GO:0005829(PANTHER)|GO:0016491(InterPro)
Eupl14g00980 315 FunFam NADPH-dependent codeinone reductase 1-1 3 315 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00980 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:14614606 Eupl4g01931 Eupl-Chr4:44996855 dispersed
Eupl Eupl-Chr14:14614606 Eupl14g01074 Eupl-Chr14:18673009 wgd