AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00989 ATGGATCTCTCAGTCTTCGAAGACCACGCAGTTCGCATAGTGGGGGGCAGGGGCCCACCGGTGGCCCAAGAGAATAGTTTAACACAAGCGCCGACCTCGTATGCAGCAGCAGTAACAAAAACAAAAGTCCTAAATACAGAGGACATACCCGAGTTACCTATTCCAGGAAGAGGAGGAGATTTTCCATCGATCAAAGTCCCTCAGGTAGCCTATGAGAAAGGGATCGAATCTTGCAAATATTGTCTTATTGGGAGGCTTGATTTCCAAAAGGTGAATGTGGAAACGGTTAGAAACCAGGCTTTACAACTGTGGCATCCATCAGGTGAGTGCAAAATCATACCCCTTGGTAAAGGTTATTTTACCATTCGCCTGGATAATGAGTTAGATTTGAAGAAAATCTGGACTGGAGGCCCTTGGGTGATCGAGAAGCAAATGATGCGCCTCAGTCAGTGGACGCCAAACTTCAATCCAAGAACTCAACGCAATAGTCATGCCCTGGTTTGGGTGCAATTTCCAGGGCTGGCTATCGAGTTTTGGGAGCTGCAGATTTTGATGGCCATGGAGAGAGCATTGGGGACTCCAGTGCAGGTGGATGCCAAAACCTTGAGGGAGTCAGGCTACCAAGCTTGCGTGCTAGTCGACATCGACCATTCCAATCCCATACCAGATAAGATTCTAGTCAAAGTTAAGGATTTTGACTTCTGGCAAGCTATTGTGTTGGGAAAGCTACCCAAATATTGCAATGGTTGGTCACTCAGTGACAGAATGCAGAGCTATTAA 780 46.92 MDLSVFEDHAVRIVGGRGPPVAQENSLTQAPTSYAAAVTKTKVLNTEDIPELPIPGRGGDFPSIKVPQVAYEKGIESCKYCLIGRLDFQKVNVETVRNQALQLWHPSGECKIIPLGKGYFTIRLDNELDLKKIWTGGPWVIEKQMMRLSQWTPNFNPRTQRNSHALVWVQFPGLAIEFWELQILMAMERALGTPVQVDAKTLRESGYQACVLVDIDHSNPIPDKILVKVKDFDFWQAIVLGKLPKYCNGWSLSDRMQSY 259
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00989 259 Pfam Domain of unknown function (DUF4283) 92 203 IPR025558 -
Eupl14g00989 259 PANTHER GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE 98 247 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00989 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr10:13109282 Eupl14g00989 Eupl-Chr14:15143165 dispersed
Eupl Eupl-Chr11:18081945 Eupl14g00989 Eupl-Chr14:15143165 dispersed
Eupl Eupl-Chr14:15143165 Eupl14g01002 Eupl-Chr14:15655430 dispersed
Eupl Eupl-Chr14:15143165 Eupl9g01486 Eupl-Chr9:31442801 transposed