AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00991 ATGACTTGCTCGCCATGGTTGCAAATAAGAACCCTACTCATAAAGAAAGGAATGCTAGCAGCAACCCCGCAGAATCGGGCAACCTGCTTGAAAGTAAAAGCCACAACTGAAGAAGGCAAAAAGTACTTTGTAGAGGCTAGGGCAATTGCTGTGAGACGTGTTCGTAAAGAAGATTTGCGCCATGTTGCCAAGGCGACCGGTGCGACTGCGGTTTCAACATTTGCTGATATGGAAGGAGAGGAAACATTTGATTCGTCACTTCTTGGATACGCAGATGAAGTTGTGGAGGAGCGCATTGCTGATGATGATGTGATTATGATAAAAGGGACCAAAACTTCGAGTGCGGTGTCATTGATCCTCAGAGGTGCAAATGACTACATGCTTGATGAGATGGAAAGAGCTTTGCATGATGCTTTATGCATTGTCAAGAGGACCCTTGAGTCCAATGTGGTAGTTGCTGGTGGAGGTGCCGTTGAGGCTGCTTTATCCGTGTACTTGGAGTATCTCGCAACGACTTTGGGATCCCGAGAACAGTTGGCAATAGCGGAGTTTGCCGAATCACTTTTAATTATACCAAAGGTTCTTGCTGTGAATGCCGCAAAGGATGCGACTGAATTGGTTGCGAAACTTCGGGCTTACCACCATACTGCACAAACCAAGGCAGATAAGCAGCATCTTTCAAGCATGGGACTAGACCTTCAAAAGGGAATTGTCCGCAACAATTTAGAAGCTGGGGTTATAGAGCCAGCAATGAGCAAGGTGAAGATAATACAGTTTGCAACTGAAGCAGCTATAACTATTCTTCGTATCGATGACATGATCAAGCTCGTCAAAGATGATCGCGATAATGAAGAGTAG 858 45.45 MTCSPWLQIRTLLIKKGMLAATPQNRATCLKVKATTEEGKKYFVEARAIAVRRVRKEDLRHVAKATGATAVSTFADMEGEETFDSSLLGYADEVVEERIADDDVIMIKGTKTSSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNVVVAGGGAVEAALSVYLEYLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKQHLSSMGLDLQKGIVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDDRDNEE 285
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00991 285 PRINTS Tailless complex polypeptide 1 (chaperone) signature 151 163 IPR017998 GO:0140662(InterPro)
Eupl14g00991 285 PRINTS Tailless complex polypeptide 1 (chaperone) signature 117 139 IPR017998 GO:0140662(InterPro)
Eupl14g00991 285 Pfam TCP-1-cpn60 chaperonin family 37 276 IPR002423 GO:0005524(InterPro)
Eupl14g00991 285 SUPERFAMILY GroEL apical domain-like 40 122 IPR027409 -
Eupl14g00991 285 Gene3D - 150 275 IPR027413 -
Eupl14g00991 285 Gene3D - 114 149 IPR027410 -
Eupl14g00991 285 PANTHER CHAPERONIN 29 276 IPR017998 GO:0005832(PANTHER)|GO:0006457(PANTHER)|GO:0051082(PANTHER)|GO:0140662(InterPro)
Eupl14g00991 285 SUPERFAMILY GroEL equatorial domain-like 149 275 IPR027413 -
Eupl14g00991 285 Gene3D GroEL 37 113 IPR027409 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00991 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:15277087 Eupl14g01005 Eupl-Chr14:15777371 dispersed
Eupl Eupl-Chr14:15277087 Eupl3g02334 Eupl-Chr3:54593486 transposed